CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10023506m.g
(
Capsella rubella
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Carubv10023506m.g
T049431_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10023506m
bHLH
178
229
QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILE
Carubv10023734m
bHLH
120
171
QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILE
Links
Other
bHLH
family TFs
Other
Capsella rubella
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009427
Calypte anna
Aan_R009427
N
Afo_R001646
Aptenodytes forsteri
Afo_R001646
N
Brh_R006914
Buceros rhinoceros
Brh_R006914
N
ENSAPLG00000016383
Anas platyrhynchos
ENSAPLG00000016383
N
ENSFALG00000001465
Ficedula albicollis
ENSFALG00000001465
N
ENSGALG00000027242
Gallus gallus
ENSGALG00000027242
N
ENSMGAG00000005982
Meleagris gallopavo
ENSMGAG00000005982
N
Gfo_R008001
Geospiza fortis
Gfo_R008001
N