Eucgr.I02069 (Eucalyptus grandis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Eucgr.I02069 T049689_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.884 0.804
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.884 0.804
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.884 0.804
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.864 0.882
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.864 0.882
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.864 0.882
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.864 0.882
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.861 0.863
BIM3
M01711_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8591 		0.861 0.902
BIM3
M06741_2.00 		Arabidopsis thaliana
DYGTSHNNVKCACGTGMY
RKCACGTGMBNNDSACRH		 Dap-seq
OMalley et al.(2016)
BIM3_col_a 		0.861 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I02069.1 bHLH 173 223
Eucgr.I02069.2 bHLH 173 223

Links

Other bHLH family TFs
Other Eucalyptus grandis TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_00669 Aspergillus nidulans CADANIAG00002005 I
ANIA_00826 Aspergillus nidulans CADANIAG00001834 I
ANIA_00975 Aspergillus nidulans CADANIAG00001677 I
ANIA_02291 Aspergillus nidulans CADANIAG00008983 I
ANIA_02732 Aspergillus nidulans CADANIAG00010381 I
ANIA_03047 Aspergillus nidulans CADANIAG00010032 I
ANIA_03478 Aspergillus nidulans CADANIAG00005279 I
ANIA_04391 Aspergillus nidulans CADANIAG00006066 I
ANIA_05334 Aspergillus nidulans CADANIAG00003762 I
ANIA_06559 Aspergillus nidulans CADANIAG00007333 I
ANIA_07516 Aspergillus nidulans CADANIAG00000619 D
ANIA_08788 Aspergillus nidulans CADANIAG00006274 I
ANIA_09046 Aspergillus nidulans CADANIAG00007807 I
ANIA_11091 Aspergillus nidulans CADANIAG00006452 I