CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.006G021800
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.006G021800
T049982_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G021800.1
bHLH
19
60
DQIIELVSKLRQLLPEIRDRRSDKVSASKVLQETCNYIRSLH
Gorai.006G021800.2
bHLH
19
60
DQIIELVSKLRQLLPEIRDRRSDKVSASKVLQETCNYIRSLH
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_13388
Cicer arietinum
Ca_13388
I
evm.TU.supercontig_2.374
Carica papaya
evm.TU.supercontig_2.374
I
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
Gorai.003G149600
Gossypium raimondii
Gorai.003G149600
I
Gorai.011G290800
Gossypium raimondii
Gorai.011G290800
I
GRMZM2G044150
Zea mays
GRMZM2G044150
I
LjSGA_010274.2
Lotus japonicus
LjSGA_010274.2
N
Lus10017431.g
Linum usitatissimum
Lus10017431.g
I
MDP0000265429
Malus domestica
MDP0000265429
I
PDK_20s1810211g001
Phoenix dactylifera
PDK_20s1810211g001
I
PGSC0003DMG400023939
Solanum tuberosum
PGSC0003DMG400023939
I
SapurV1A.0042s0120
Salix purpurea
SapurV1A.0042s0120
I
SapurV1A.0061s0670
Salix purpurea
SapurV1A.0061s0670
I
Sb09g016240
Sorghum bicolor
Sb09g016240
I
Si024229m.g
Setaria italica
Si024229m.g
I