SMU15040320 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15040320 T051727_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.855 0.827
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.855 0.827
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.855 0.827
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.855 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15040320 bHLH 148 200

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001045 Calypte anna Aan_R001045 I 0.855
ACYPI54231 Acyrthosiphon pisum ACYPI54231 I 0.879
Afo_R003467 Aptenodytes forsteri Afo_R003467 I 0.855
Alligator_sinensis_CCG002586.1 Alligator sinensis Alligator_sinensis_CCG002586.1 I 0.855
BGLB008796 Biomphalaria glabrata BGLB008796 I 0.853
Brh_R002964 Buceros rhinoceros Brh_R002964 I 0.855
Cmyd_10011491 Chelonia mydas Cmyd_10011491 I 0.855
ENSACAG00000011821 Anolis carolinensis ENSACAG00000011821 I 0.890
ENSAMEG00000019030 Ailuropoda melanoleuca ENSAMEG00000019030 I 0.855
ENSAMXG00000025611 Astyanax mexicanus ENSAMXG00000025611 I 0.890
ENSAPLG00000001417 Anas platyrhynchos ENSAPLG00000001417 I 0.855
ENSCSAG00000019609 Chlorocebus sabaeus ENSCSAG00000019609 I 0.855
ENSFALG00000014487 Ficedula albicollis ENSFALG00000014487 I 0.855
ENSLACG00000013215 Latimeria chalumnae ENSLACG00000013215 I 0.855
ENSLOCG00000018351 Lepisosteus oculatus ENSLOCG00000018351 I 0.890
ENSMEUG00000016077 Macropus eugenii ENSMEUG00000016077 I 0.855
ENSMICG00000010110 Microcebus murinus ENSMICG00000010110 I 0.855
ENSNLEG00000019265 Nomascus leucogenys ENSNLEG00000019265 I 0.855
ENSOARG00000008159 Ovis aries ENSOARG00000008159 I 0.855
ENSP00000275461 Macaca fascicularis ENSP00000275461 I 0.855
ENSP00000275461-D1 Bos grunniens ENSP00000275461-D1 I 0.855
ENSPANG00000010936 Papio anubis ENSPANG00000010936 I 0.855
ENSPFOG00000020055 Poecilia formosa ENSPFOG00000020055 I 0.866
ENSPPYG00000017753 Pongo abelii ENSPPYG00000017753 I 0.855
ENSPSIG00000000691 Pelodiscus sinensis ENSPSIG00000000691 I 0.855
ENSSHAG00000013034 Sarcophilus harrisii ENSSHAG00000013034 I 0.855
ENSSTOG00000025739 Ictidomys tridecemlineatus ENSSTOG00000025739 I 0.855
ENSTSYG00000010121 Tarsius syrichta ENSTSYG00000010121 I 0.855
ENSXMAG00000020141 Xiphophorus maculatus ENSXMAG00000020141 I 0.866
Ferd3l Dipodomys ordii ENSDORG00000012867 I 0.855
FERD3L Equus caballus ENSECAG00000002518 I 0.855
FERD3L Erinaceus europaeus ENSEEUG00000004309 I 0.855
FERD3L Felis catus ENSFCAG00000010289 I 0.855
FERD3L Loxodonta africana ENSLAFG00000012782 I 0.855
FERD3L Dasypus novemcinctus ENSDNOG00000037813 I 0.855
FERD3L Takifugu rubripes ENSTRUG00000014737 I 0.864
FERD3L Tetraodon nigroviridis ENSTNIG00000017777 I 0.864
FERD3L Taeniopygia guttata ENSTGUG00000002644 I 0.855
FERD3L Tupaia belangeri ENSTBEG00000003400 I 0.855
ferd3l Danio rerio ENSDARG00000092160 I 0.890
FERD3L Canis familiaris ENSCAFG00000002506 I 0.855
ferd3l Xenopus tropicalis XB-GENE-983144 I 0.855
FERD3L Sus scrofa ENSSSCG00000015371 I 0.855
FERD3L Bos taurus ENSBTAG00000039955 I 0.855
FERD3L Pteropus vampyrus ENSPVAG00000001711 I 0.855
FERD3L Meleagris gallopavo ENSMGAG00000015843 I 0.855
FERD3L Myotis lucifugus ENSMLUG00000006930 I 0.855
FERD3L Macaca mulatta ENSMMUG00000011174 I 0.855
FERD3L Monodelphis domestica ENSMODG00000001405 I 0.855
Ferd3l Mus musculus ENSMUSG00000046518 I 0.855
FERD3L Gorilla gorilla ENSGGOG00000021943 I 0.855
FERD3L Ornithorhynchus anatinus ENSOANG00000009615 I 0.855
FERD3L Gallus gallus ENSGALG00000010862 I 0.855
FERD3L Oryctolagus cuniculus ENSOCUG00000016121 I 0.855
FERD3L Homo sapiens ENSG00000146618 D 0.855
Ferd3l Rattus norvegicus ENSRNOG00000011091 I 0.855
FERD3L Pan troglodytes ENSPTRG00000018961 I 0.855
FERD3L Procavia capensis ENSPCAG00000013680 I 0.855
FERD3L Gasterosteus aculeatus ENSGACG00000006421 I 0.864
FERD3L Oryzias latipes ENSORLG00000004008 I 0.890
FERD3L Ochotona princeps ENSOPRG00000004265 I 0.855
FERD3L Otolemur garnettii ENSOGAG00000014773 I 0.855
Gfo_R002784 Geospiza fortis Gfo_R002784 I 0.855
LCUP001463 Lucilia cuprina LCUP001463 I 0.855
LLOJ008652 Lutzomyia longipalpis LLOJ008652 I 0.855
LotgiG70434 Lottia gigantea LotgiG70434 I 0.844
MDOA004267 Musca domestica MDOA004267 I 0.855
MDOA011992 Musca domestica MDOA011992 I 0.855
Myotis_brandtii_FERD3L_10031741 Myotis brandtii Myotis_brandtii_FERD3L_10031741 I 0.855
Ocbimv22002150m.g Octopus bimaculoides Ocbimv22002150m.g I 0.855
Ogr11551 Ophisaurus gracilis Ogr11551 I 0.855
PPAI004805 Phlebotomus papatasi PPAI004805 I 0.855
Sakowv30007278m.g Saccoglossus kowalevskii Sakowv30007278m.g I 0.854
SMAR003412 Strigamia maritima SMAR003412 I 0.874
SMAR006706 Strigamia maritima SMAR006706 I 0.855
YQE_05939 Dendroctonus ponderosae YQE_05939 I 0.855