CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

CJA08473 *(Caenorhabditis japonica)* Brinker
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF09607 (BrkDBD)	IPR018586	CJA08473	T055528_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Y44A6D.3 M00590_2.00	Caenorhabditis elegans	NYGCGCRRN	NYYGCGCRN	PBM Narasimhan et al.(2015) pTH10696	0.712	0.712
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CJA08473	Brinker	14	65	GRMLKYSVDDKLTIINYAKSHGNRAAGREFNVAESSIREWRKNENKLIQTKN

Links
Other Brinker family TFs
Other *Caenorhabditis japonica* TFs