Y44A6D.3 (Caenorhabditis elegans)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 WBGene00012854 T055742_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Y44A6D.3
M00590_2.00		 Caenorhabditis elegans
NYGCGCRRN
NYYGCGCRN		 PBM
Narasimhan et al.(2015)
pTH10696		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00590_2.00 Brinker 16 69

DNA Binding Domains

Protein ID Domain From To Sequence
Y44A6D.3a Brinker 16 69
Y44A6D.3b Brinker 18 70
Y44A6D.3c Brinker 16 69

Links

Other Brinker family TFs
Other Caenorhabditis elegans TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN19762 Caenorhabditis brenneri CBN19762 I 0.942
CRE21236 Caenorhabditis remanei CRE21236 I 0.923
CBG05538 Caenorhabditis briggsae CBG05538 I 0.904
CGOC_0000345301 Cylicostephanus goldi CGOC_0000345301 I 0.750
ACAC_0000945701 Angiostrongylus cantonensis ACAC_0000945701 N 0.731
ANCCAN_18878 Ancylostoma caninum ANCCAN_18878 I 0.731
ANCCEY_14798 Ancylostoma ceylanicum ANCCEY_14798 N 0.731
ANCDUO_21609 Ancylostoma duodenale ANCDUO_21609 I 0.731
DICVIV_05295 Dictyocaulus viviparus DICVIV_05295 N 0.731
HPBE_0001384101 Heligmosomoides bakeri HPBE_0001384101 N 0.731
NBR_0001584001 Nippostrongylus brasiliensis NBR_0001584001 N 0.731
NBR_0002149901 Nippostrongylus brasiliensis NBR_0002149901 N 0.731
NECAME_08042 Necator americanus NECAME_08042 N 0.731
OESDEN_01522 Oesophagostomum dentatum OESDEN_01522 N 0.731
PPA12559 Pristionchus pacificus PPA12559 N 0.725
CJA08473 Caenorhabditis japonica CJA08473 I 0.712
CJA36020 Caenorhabditis japonica CJA36020 I 0.712
Hba_18627 Heterorhabditis bacteriophora Hba_18627 I 0.712
HCOI02081600 Haemonchus contortus HCOI02081600 N 0.712
nDi.2.2.2.g11238 Dirofilaria immitis nDi.2.2.2.g11238 I 0.710
DME_0000033301 Dracunculus medinensis DME_0000033301 N 0.708