CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA12559
(
Pristionchus pacificus
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09607 (BrkDBD)
IPR018586
PPA12559
T055727_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA12559
Brinker
22
72
LKQYSVEEKLDIIDYAKNTGNRAAGREFNVAESSIREWRKHEVKLRETLAS
Links
Other
Brinker
family TFs
Other
Pristionchus pacificus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g9935
Steinernema feltiae
L889_g9935
N
0.784
L898_g18025
Steinernema monticolum
L898_g18025
N
0.784
L893_g17711
Steinernema glaseri
L893_g17711
N
0.784
DME_0000033301
Dracunculus medinensis
DME_0000033301
N
0.771
GPUH_0001120501
Gongylonema pulchrum
GPUH_0001120501
N
0.765
ASIM_0001398401
Anisakis simplex
ASIM_0001398401
N
0.765
OFLC_0000276401
Onchocerca flexuosa
OFLC_0000276401
N
0.765
WBGene00242919
Onchocerca volvulus
WBGene00242919
N
0.765
Bm6553
Brugia malayi
Bm6553
N
0.765
TCLT_0000958101
Thelazia callipaeda
TCLT_0000958101
N
0.765
nAv.1.0.1.g02361
Acanthocheilonema viteae
nAv.1.0.1.g02361
N
0.765
nLs.2.1.2.g08792
Litomosoides sigmodontis
nLs.2.1.2.g08792
N
0.765
WUBG_06876
Wuchereria bancrofti
WUBG_06876
N
0.765
OESDEN_01522
Oesophagostomum dentatum
OESDEN_01522
N
0.745
ANCCEY_14798
Ancylostoma ceylanicum
ANCCEY_14798
N
0.745
PTRK_0001041600
Parastrongyloides trichosuri
PTRK_0001041600
N
0.745
BXY_0367500
Bursaphelenchus xylophilus
BXY_0367500
N
0.745
SVE_0177100
Strongyloides venezuelensis
SVE_0177100
N
0.725
SPAL_0000348500
Strongyloides papillosus
SPAL_0000348500
N
0.725
NBR_0001584001
Nippostrongylus brasiliensis
NBR_0001584001
N
0.725
NECAME_08042
Necator americanus
NECAME_08042
N
0.725
RSKR_0000031900
Rhabditophanes kr3021
RSKR_0000031900
N
0.725
Hba_18627
Heterorhabditis bacteriophora
Hba_18627
I
0.725
ACAC_0000945701
Angiostrongylus cantonensis
ACAC_0000945701
N
0.725
Y44A6D.3
Caenorhabditis elegans
WBGene00012854
D
0.725
CRE21236
Caenorhabditis remanei
CRE21236
I
0.725
CBG05538
Caenorhabditis briggsae
CBG05538
I
0.725
ANCCAN_18878
Ancylostoma caninum
ANCCAN_18878
I
0.725
ANCDUO_21609
Ancylostoma duodenale
ANCDUO_21609
I
0.725
L892_g11291
Steinernema scapterisci
L892_g11291
N
0.725
HPBE_0001384101
Heligmosomoides bakeri
HPBE_0001384101
N
0.725
CBN19762
Caenorhabditis brenneri
CBN19762
I
0.712
DICVIV_05295
Dictyocaulus viviparus
DICVIV_05295
N
0.712
CGOC_0000345301
Cylicostephanus goldi
CGOC_0000345301
I
0.706
NBR_0002149901
Nippostrongylus brasiliensis
NBR_0002149901
N
0.706