CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ATF3 *(Callithrix jacchus)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00170 (bZIP_1)	IPR011616	ENSCJAG00000015735	T059238_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Atf3 M00758_2.00	Mus musculus	NNRTKAYNN	NNRTMAYNN	PBM Weirauch et al.(2013) pTH2684	0.786	0.757
ATF3 M04321_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) ATF3_eDBD_HT-SELEX	0.786	0.861
Atf3 M01807_2.00	Mus musculus	GATGACGY	RCGTCATC	PBM Weirauch et al.(2014) pTH5018	0.786	0.757
ATF3 M04323_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) ATF3_FL_HT-SELEX	0.786	0.861
ATF3 M04032_2.00	Homo sapiens	RTGACGTCAK	MTGACGTCAY	SELEX Rodriguez-Martinez et al.(2017) ATF3.1	0.786	0.861
Atf3 M08825_2.00	Mus musculus	VTGACTCAB	VTGAGTCAB	Misc Kulakovskiy et al.(2013) ATF3_MOUSE.H11MO.0.A	0.892	0.903
ATF3 M04033_2.00	Homo sapiens	RTGACTCAY	RTGAGTCAY	SELEX Rodriguez-Martinez et al.(2017) ATF3.2	0.786	0.861
JDP2 M02836_2.00	Homo sapiens	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) JDP2_1	0.881	0.726
ATF3 M07822_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) GM12878_ATF3_HudsonAlpha	0.786	0.861
JDP2 M02837_2.00	Homo sapiens	NRTGACGTCATB	VATGACGTCAYN	SELEX Jolma et al.(2013) JDP2_2	0.881	0.726
ATF3 M07823_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) H1-hESC_ATF3_HudsonAlpha	0.786	0.861
JDP2 M02838_2.00	Homo sapiens	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) JDP2_3	0.881	0.726
ATF3 M07824_2.00	Homo sapiens	VGTCACGTGRB	VYCACGTGACB	ChIP-seq Gerstein et al.(2012) HepG2_ATF3_HudsonAlpha	0.786	0.861
JDP2 M02839_2.00	Homo sapiens	NRTGACGTCATN	NATGACGTCAYN	SELEX Jolma et al.(2013) JDP2_4	0.881	0.726
ATF3 M07825_2.00	Homo sapiens	VRTSACGTVR	YBACGTSAYB	ChIP-seq Gerstein et al.(2012) K562_ATF3_Harvard	0.786	0.861
JDP2 M04285_2.00	Homo sapiens	NATGASTCATV	BATGASTCATN	SELEX Yin et al.(2017) JDP2_eDBD_HT-SELEX_1	0.881	0.726
ATF3 M08187_2.00	Homo sapiens	GTCACGTG	CACGTGAC	ChIP-seq Contrino et al.(2012) Mv41	0.786	0.861
JDP2 M04286_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) JDP2_eDBD_HT-SELEX_2	0.881	0.726
ATF3 M08188_2.00	Homo sapiens	NRTGASTCAY	RTGASTCAYN	ChIP-seq Contrino et al.(2012) Mv43	0.786	0.861
JDP2 M04289_2.00	Homo sapiens	NRTGMSKCAYN	NRTGMSKCAYN	SELEX Yin et al.(2017) JDP2_FL_HT-SELEX_1	0.881	0.726
ATF3 M08801_2.00	Homo sapiens	RRTSACGTVRB	VYBACGTSAYY	Misc Kulakovskiy et al.(2013) ATF3_HUMAN.H11MO.0.A	0.786	0.861
JDP2 M04290_2.00	Homo sapiens	NRTKACRTMAYN	NRTKAYGTMAYN	SELEX Yin et al.(2017) JDP2_FL_HT-SELEX_2	0.881	0.726
ATF3 M09489_2.00	Homo sapiens	NVTGASTCABNN	NNVTGASTCABN	Misc Heinz et al.(2010) GBM-ATF3_GSE33912	0.786	0.861
JDP2 M04287_2.00	Homo sapiens	BATGASTCAYN	NRTGASTCATV	SELEX Yin et al.(2017) JDP2_eDBD_Methyl-HT-SELEX_1	0.881	0.726
ATF3 M09977_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_02	0.786	0.861
JDP2 M04288_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) JDP2_eDBD_Methyl-HT-SELEX_2	0.881	0.726
ATF3 M09978_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_05	0.786	0.861
JDP2 M04291_2.00	Homo sapiens	NRTGASTCAYN	NRTGASTCAYN	SELEX Yin et al.(2017) JDP2_FL_Methyl-HT-SELEX_1	0.881	0.726
ATF3 M09979_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6_01	0.786	0.861
JDP2 M04292_2.00	Homo sapiens	NVTKACRTCAYN	NRTGAYGTMABN	SELEX Yin et al.(2017) JDP2_FL_Methyl-HT-SELEX_2	0.881	0.726
ATF3 M09980_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6_02	0.786	0.861
Jdp2 M00125_2.00	Mus musculus	NRTGAYDNNN	NNNHRTCAYN	PBM Badis et al.(2009) Jundm2_0911	0.879	0.726
ATF3 M09981_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF3_Q6	0.786	0.861
Jdp2 M01810_2.00	Mus musculus	NNTGACGYMW	WKRCGTCANN	PBM Weirauch et al.(2014) pTH5464	0.879	0.726
ATF3 M04322_2.00	Homo sapiens	NRTGACRTCAYH	DRTGAYGTCAYN	SELEX Yin et al.(2017) ATF3_eDBD_Methyl-HT-SELEX	0.786	0.861
Jdp2 M02861_2.00	Mus musculus	ATGASTCAT	ATGASTCAT	SELEX Jolma et al.(2013) Jdp2_1	0.879	0.726
ATF3 M04324_2.00	Homo sapiens	NRTGACRTCAYH	DRTGAYGTCAYN	SELEX Yin et al.(2017) ATF3_FL_Methyl-HT-SELEX	0.786	0.861
Jdp2 M02862_2.00	Mus musculus	VATGACGTCAYN	NRTGACGTCATB	SELEX Jolma et al.(2013) Jdp2_2	0.879	0.726
Jdp2 M10033_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$JDP2_03	0.879	0.726
Atf3 M03648_2.00	Drosophila melanogaster	NRTKACGTMAYN	NRTKACGTMAYN	SELEX Nitta et al.(2015) Atf3_1	0.789	0.581
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSCJAP00000028977	bZIP	83	119	PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKVSAV
ENSCJAP00000047293	bZIP	54	89	PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKLPR
ENSCJAP00000049870	bZIP	83	118	PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKLPR
ENSCJAP00000051643	bZIP	83	144	PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYM
ENSCJAP00000052036	bZIP	83	144	PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYM

Links
Other bZIP family TFs
Other *Callithrix jacchus* TFs

173 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

ATF3 (Callithrix jacchus) bZIP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

173 Related TFs

ATF3 **(Callithrix jacchus)
bZIP**