CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSLOCG00000011103
(
Lepisosteus oculatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSLOCG00000011103
T060107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf4
M00759_2.00
Mus musculus
NNNNKRCDHVHNN
NNDBDHGYMNNNN
PBM
Weirauch et al.(2013)
pTH1014
0.881
0.823
Atf4
M02865_2.00
Mus musculus
DRBATGAYGCAATM
KATTGCRTCATVYH
SELEX
Jolma et al.(2013)
Atf4_1
0.881
0.823
Atf4
M08833_2.00
Mus musculus
DNMTGATGCAAY
RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_MOUSE.H11MO.0.A
0.881
0.823
Atf4
M09496_2.00
Mus musculus
MTGATGYAAY
RTTRCATCAK
Misc
Heinz et al.(2010)
MEF-Atf4_GSE35681
0.881
0.823
ATF4
M02834_2.00
Homo sapiens
DNMTGAYGCAAYM
KRTTGCRTCAKNH
SELEX
Jolma et al.(2013)
ATF4_1
0.881
0.806
ATF4
M04274_2.00
Homo sapiens
RDATGACGTCATHY
RDATGACGTCATHY
SELEX
Yin et al.(2017)
ATF4_eDBD_HT-SELEX
0.881
0.806
ATF4
M04276_2.00
Homo sapiens
RKATGACGTCATMY
RKATGACGTCATMY
SELEX
Yin et al.(2017)
ATF4_FL_HT-SELEX
0.881
0.806
ATF4
M04027_2.00
Homo sapiens
VNATGACGTCABNY
RNVTGACGTCATNB
SELEX
Rodriguez-Martinez et al.(2017)
ATF4.1
0.881
0.806
ATF4
M08796_2.00
Homo sapiens
DNMTGATGCAAY
RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_HUMAN.H11MO.0.A
0.881
0.806
ATF4
M09963_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q2
0.881
0.806
ATF4
M09964_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q5
0.881
0.806
ATF4
M09965_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q6
0.881
0.806
ATF4
M04275_2.00
Homo sapiens
RKATGACATCATCY
RGATGATGTCATMY
SELEX
Yin et al.(2017)
ATF4_eDBD_Methyl-HT-SELEX
0.881
0.806
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000013640
bZIP
334
395
VEKKLKKMEQNKTAATRYRQKKRAEQEALGVECAELEKRNKELAEKADSISKEIQYLKDLIE
Links
Other
bZIP
family TFs
Other
Lepisosteus oculatus
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16836
Phytophthora parasitica
F443_16836
N
0.000
fgenesh1_pm.C_scaffold_9000158
Phytophthora capsici
fgenesh1_pm.C_scaffold_9000158
N
0.000
fgenesh_scip_prom.28083.2088
Phytophthora lateralis
fgenesh_scip_prom.28083.2088
N
0.000
HpaG808627
Hyaloperonospora arabidopsidis
HpaG808627
N
0.000
maker-par_contig_2454-snap-gene-0.3
Pythium arrhenomanes
maker-par_contig_2454-snap-gene-0.3
N
0.000
maker-par_contig_5863-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_5863-snap-gene-0.1
N
0.000
maker-par_contig_6289-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6289-fgenesh-gene-0.0
N
0.000
maker-par_contig_7729-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_7729-fgenesh-gene-0.0
N
0.000
maker-pir_contig_1091-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1091-fgenesh-gene-0.2
N
0.000
maker-pir_contig_2120-snap-gene-0.3
Pythium irregulare
maker-pir_contig_2120-snap-gene-0.3
N
0.000
maker-pir_contig_2908-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2908-fgenesh-gene-0.0
N
0.000
maker-piw_contig_6027-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_6027-fgenesh-gene-0.0
N
0.000
maker-piw_contig_643-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_643-fgenesh-gene-0.2
N
0.000
Phyra84533
Phytophthora ramorum
Phyra84533
N
0.000
Physo142761
Phytophthora sojae
Physo142761
N
0.000
PITG_21561
Phytophthora infestans
PITG_21561
N
0.000
PYU1_G006427
Pythium ultimum
PYU1_G006427
N
0.000
PYU1_G006442
Pythium ultimum
PYU1_G006442
N
0.000