CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G05520
(
Glycine max
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GLYMA12G05520
T062971_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.919
0.952
AT1G06070
M06744_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_col_a
0.885
0.903
AT1G06070
M06745_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a
0.885
0.903
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G05520.2
bZIP
192
253
DPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTHGMTAENS
Links
Other
bZIP
family TFs
Other
Glycine max
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_76
Arabidopsis lyrata
Al_scaffold_0007_76
I
0.795
Aquca_006_00159
Aquilegia coerulea
Aquca_006_00159
I
0.788
Aquca_058_00063
Aquilegia coerulea
Aquca_058_00063
I
0.828
AT1G06070
Arabidopsis thaliana
AT1G06070
D
0.885
AT4G38900
Arabidopsis thaliana
AT4G38900
I
0.812
BGIOSGA029105
Oryza indica
BGIOSGA029105
I
0.788
BGIOSGA029106
Oryza indica
BGIOSGA029106
I
0.788
Bo3g149620
Brassica oleracea
Bo3g149620
I
0.805
Bo5g007170
Brassica oleracea
Bo5g007170
I
0.888
Bo7g119550
Brassica oleracea
Bo7g119550
I
0.812
Bo8g005940
Brassica oleracea
Bo8g005940
I
0.900
Bostr.25219s0353
Boechera stricta
Bostr.25219s0353
I
0.900
Bostr.25542s0069
Boechera stricta
Bostr.25542s0069
I
0.812
Bra010722
Brassica rapa
Bra010722
I
0.812
Bra015471
Brassica rapa
Bra015471
I
0.888
Bra030637
Brassica rapa
Bra030637
I
0.888
Bra033582
Brassica rapa
Bra033582
I
0.812
BRADI3G41980
Brachypodium distachyon
BRADI3G41980
I
0.788
BRADI5G14497
Brachypodium distachyon
BRADI5G14497
I
0.815
Cagra.1671s0236
Capsella grandiflora
Cagra.1671s0236
I
0.900
Carubv10008993m.g
Capsella rubella
Carubv10008993m.g
I
0.900
cassava30160.valid.m1
Manihot esculenta
cassava30160.valid.m1
I
0.812
cassava32399.m1
Manihot esculenta
cassava32399.m1
I
0.919
cassava38273.valid.m1
Manihot esculenta
cassava38273.valid.m1
I
0.812
cassava43164.valid.m1
Manihot esculenta
cassava43164.valid.m1
I
0.919
Ca_02692
Cicer arietinum
Ca_02692
I
0.895
Ca_27693
Cicer arietinum
Ca_27693
I
0.812
chr3.CM0106.340.nd
Lotus japonicus
chr3.CM0106.340.nd
I
0.895
Ciclev10028062m.g
Citrus clementina
Ciclev10028062m.g
I
0.812
Cla016124
Citrullus lanatus
Cla016124
I
0.812
Cla016125
Citrullus lanatus
Cla016125
I
0.812
Cla022201
Citrullus lanatus
Cla022201
I
0.856
Cla022204
Citrullus lanatus
Cla022204
I
0.855
Cucsa.062530
Cucumis sativus
Cucsa.062530
I
0.918
Cucsa.251880
Cucumis sativus
Cucsa.251880
I
0.900
Cucsa.382180
Cucumis sativus
Cucsa.382180
I
0.812
Cucsa.382190
Cucumis sativus
Cucsa.382190
I
0.812
estExt_gwp_gw1.C_200078
Physcomitrella patens
estExt_gwp_gw1.C_200078
I
0.794
estExt_gwp_gw1.C_5120003
Physcomitrella patens
estExt_gwp_gw1.C_5120003
I
0.820
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.907
Eucgr.I01335
Eucalyptus grandis
Eucgr.I01335
I
0.812
evm.TU.supercontig_150.7
Carica papaya
evm.TU.supercontig_150.7
I
0.812
evm.TU.supercontig_81.160
Carica papaya
evm.TU.supercontig_81.160
I
0.797
e_gw1.20.99.1
Physcomitrella patens
e_gw1.20.99.1
I
0.794
F775_13434
Aegilops tauschii
F775_13434
I
0.816
F775_32059
Aegilops tauschii
F775_32059
I
0.788
gene01680-v1.0-hybrid
Fragaria vesca
gene01680-v1.0-hybrid
I
0.793
gene23487-v1.0-hybrid
Fragaria vesca
gene23487-v1.0-hybrid
I
0.919
GLYMA04G02850
Glycine max
GLYMA04G02850
I
0.792
GLYMA11G11791
Glycine max
GLYMA11G11791
I
0.812
GLYMA11G13510
Glycine max
GLYMA11G13510
I
0.919
GLYMA12G04050
Glycine max
GLYMA12G04050
I
0.812
GLYMA13G42030
Glycine max
GLYMA13G42030
I
0.895
GLYMA15G03350
Glycine max
GLYMA15G03350
I
0.895
Gorai.001G243800
Gossypium raimondii
Gorai.001G243800
I
0.812
Gorai.005G015900
Gossypium raimondii
Gorai.005G015900
I
0.917
Gorai.005G248900
Gossypium raimondii
Gorai.005G248900
I
0.812
Gorai.006G229500
Gossypium raimondii
Gorai.006G229500
I
0.899
Gorai.011G140400
Gossypium raimondii
Gorai.011G140400
I
0.904
GRMZM2G332294
Zea mays
GRMZM2G332294
I
0.783
GSMUA_Achr11G14990_001
Musa acuminata
GSMUA_Achr11G14990_001
I
0.822
GSMUA_Achr3G12290_001
Musa acuminata
GSMUA_Achr3G12290_001
I
0.812
GSMUA_Achr5G25700_001
Musa acuminata
GSMUA_Achr5G25700_001
I
0.821
GSMUA_Achr8G12090_001
Musa acuminata
GSMUA_Achr8G12090_001
I
0.790
GSMUA_AchrUn_randomG00680_001
Musa acuminata
GSMUA_AchrUn_randomG00680_001
I
0.822
gw1.20.225.1
Physcomitrella patens
gw1.20.225.1
I
0.820
Lus10008150.g
Linum usitatissimum
Lus10008150.g
I
0.856
Lus10018061.g
Linum usitatissimum
Lus10018061.g
I
0.812
Lus10019376.g
Linum usitatissimum
Lus10019376.g
I
0.911
Lus10042057.g
Linum usitatissimum
Lus10042057.g
I
0.812
MDP0000234166
Malus domestica
MDP0000234166
I
0.807
MDP0000435971
Malus domestica
MDP0000435971
I
0.851
mgf000302m
Mimulus guttatus
mgf000302m
I
0.812
mgf004912m
Mimulus guttatus
mgf004912m
I
0.812
MLOC_64362
Hordeum vulgare
MLOC_64362
I
0.827
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.905
MLOC_75510
Hordeum vulgare
MLOC_75510
I
0.788
MTR_4g072090
Medicago truncatula
MTR_4g072090
I
0.812
OB09G23080
Oryza brachyantha
OB09G23080
I
0.905
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.905
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.905
orange1.1g007579m.g
Citrus sinensis
orange1.1g007579m.g
I
0.812
PDK_20s1312701g003
Phoenix dactylifera
PDK_20s1312701g003
I
0.798
PGSC0003DMG400001659
Solanum tuberosum
PGSC0003DMG400001659
I
0.812
PK00843.1
Cannabis sativa
PK00843.1
I
0.812
PK20942.1
Cannabis sativa
PK20942.1
D
0.919
Pm007522
Prunus mume
Pm007522
I
0.851
POPTR_0004s17080
Populus trichocarpa
POPTR_0004s17080
I
0.812
POPTR_0009s12830
Populus trichocarpa
POPTR_0009s12830
I
0.812
POPTR_0017s05610
Populus trichocarpa
POPTR_0017s05610
I
0.919
RF2A
Oryza sativa
OS09G0516200
I
0.905
SapurV1A.0091s0130
Salix purpurea
SapurV1A.0091s0130
I
0.812
SapurV1A.0379s0290
Salix purpurea
SapurV1A.0379s0290
I
0.812
Sb06g021350
Sorghum bicolor
Sb06g021350
I
0.820
Sb07g025490
Sorghum bicolor
Sb07g025490
I
0.790
scaffold_100594.1
Arabidopsis lyrata
scaffold_100594.1
I
0.900
SELMODRAFT_129846
Selaginella moellendorffii
SELMODRAFT_129846
I
0.822
SELMODRAFT_34663
Selaginella moellendorffii
SELMODRAFT_34663
I
0.822
SELMODRAFT_77868
Selaginella moellendorffii
SELMODRAFT_77868
I
0.822
Si015587m.g
Setaria italica
Si015587m.g
I
0.790
Solyc01g110480.2
Solanum lycopersicum
Solyc01g110480.2
I
0.812
Solyc06g053350.2
Solanum lycopersicum
Solyc06g053350.2
I
0.883
TCM_006766
Theobroma cacao
TCM_006766
I
0.812
TCM_019998
Theobroma cacao
TCM_019998
I
0.919
Thhalv10007692m.g
Eutrema salsugineum
Thhalv10007692m.g
I
0.900
Thhalv10024895m.g
Eutrema salsugineum
Thhalv10024895m.g
I
0.812
Traes_2AL_FA1957F59
Triticum aestivum
Traes_2AL_FA1957F59
I
0.827
Traes_7BS_7B68879A9
Triticum aestivum
Traes_7BS_7B68879A9
I
0.788
Traes_7DS_3463CAE33
Triticum aestivum
Traes_7DS_3463CAE33
I
0.788
Traes_7DS_47B5A7FFF
Triticum aestivum
Traes_7DS_47B5A7FFF
I
0.846
TRIUR3_16287
Triticum urartu
TRIUR3_16287
I
0.858
TRIUR3_31242
Triticum urartu
TRIUR3_31242
I
0.788
VIT_03s0038g00860
Vitis vinifera
VIT_03s0038g00860
I
0.812
VIT_05s0102g01120
Vitis vinifera
VIT_05s0102g01120
I
0.919