CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g023420
(
Sorghum bicolor
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Sb10g023420
T067746_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HY5
M06790_2.00
Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH
Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a
0.839
0.891
HY5
M08407_2.00
Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN
ChIP-chip
Mathelier et al.(2014)
MA0551.1
0.839
0.891
HY5
M09919_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HY5_01
0.839
0.891
Q39895_SOYBN
M10048_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_01
0.839
0.891
Q39895_SOYBN
M10049_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_02
0.839
0.891
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g023420.1
bZIP
60
123
DKEHRRLKRLLRNRVSAQQARERKKAYLSELEVRVKDLEKRNSELEERLSTLQNENQMLRQILK
Links
Other
bZIP
family TFs
Other
Sorghum bicolor
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000006979
Gadus morhua
ENSGMOG00000006979
I
0.000
ENSPMAG00000004458
Petromyzon marinus
ENSPMAG00000004458
N
0.000
MNT
Tetraodon nigroviridis
ENSTNIG00000005816
I
0.000
MNT
Takifugu rubripes
ENSTRUG00000015800
I
0.000
SMAR003191
Strigamia maritima
SMAR003191
I
0.000