CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc02g085610.2
(
Solanum lycopersicum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Solyc02g085610.2
T068196_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.871
0.656
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.871
0.656
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.866
0.859
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.866
0.859
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.866
0.859
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.866
0.859
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.866
0.859
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.852
0.641
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.852
0.641
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.837
0.672
CPRF3_PETCR
M10071_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_01
0.828
0.688
CPRF3_PETCR
M10072_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_Q2
0.828
0.688
CPRF1_PETCR
M10066_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.819
0.625
CPRF1_PETCR
M10067_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.819
0.625
CPRF1_PETCR
M10068_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.819
0.625
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.819
0.641
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.818
0.672
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.811
0.688
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.811
0.688
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.807
0.688
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW
WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.805
0.594
EMBP1_WHEAT
M09921_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
0.805
0.594
EMBP1_WHEAT
M09922_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
0.805
0.594
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.805
0.641
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.789
0.672
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.789
0.672
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.789
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc02g085610.2.1
bZIP
186
249
ERELKRQKRKQSNRESARRSRLRKQAECEELQRRVEALSHENHSLKDELQRLSEECEKLTSENN
Links
Other
bZIP
family TFs
Other
Solanum lycopersicum
TFs
314 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G37795
Brachypodium distachyon
BRADI2G37795
N
Pavir.Db01105
Panicum virgatum
Pavir.Db01105
N
Pavir.Ea01242
Panicum virgatum
Pavir.Ea01242
N
Pavir.Ga01170
Panicum virgatum
Pavir.Ga01170
N
Pavir.J05000
Panicum virgatum
Pavir.J05000
N
Pavir.J32630
Panicum virgatum
Pavir.J32630
N
Sb01g016055
Sorghum bicolor
Sb01g016055
N
Sb01g017605
Sorghum bicolor
Sb01g017605
N
Sb02g005850
Sorghum bicolor
Sb02g005850
N
Sb02g005860
Sorghum bicolor
Sb02g005860
N
Sb02g007217
Sorghum bicolor
Sb02g007217
N
Sb02g027384
Sorghum bicolor
Sb02g027384
N
Sb02g028930
Sorghum bicolor
Sb02g028930
N
Sb03g011600
Sorghum bicolor
Sb03g011600
N
Sb03g031563
Sorghum bicolor
Sb03g031563
N
Sb03g047180
Sorghum bicolor
Sb03g047180
N
Sb05g007130
Sorghum bicolor
Sb05g007130
N
Traes_1DL_DD0FCDF93
Triticum aestivum
Traes_1DL_DD0FCDF93
N
Traes_2DL_F37E51175
Triticum aestivum
Traes_2DL_F37E51175
N
Traes_5BL_FC8AB1380
Triticum aestivum
Traes_5BL_FC8AB1380
N
Traes_5DL_FC7D15A05
Triticum aestivum
Traes_5DL_FC7D15A05
N
Traes_5DS_E9D675FAC
Triticum aestivum
Traes_5DS_E9D675FAC
N