Pavir.J05000 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J05000 T181792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05000.1.p FAR1 30 122

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ga01170 Panicum virgatum Pavir.Ga01170 N 0.940
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.933
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.833
Pavir.J07161 Panicum virgatum Pavir.J07161 N 0.831
Pavir.Ia02192 Panicum virgatum Pavir.Ia02192 N 0.791
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.789
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.789
Sb08g002650 Sorghum bicolor Sb08g002650 N 0.778
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.778
Pavir.J32630 Panicum virgatum Pavir.J32630 N 0.770
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.757
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.756
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.750
Traes_5DL_FC7D15A05 Triticum aestivum Traes_5DL_FC7D15A05 N 0.744
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.733
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.733
Sb01g016055 Sorghum bicolor Sb01g016055 N 0.733
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.733
Sb02g005850 Sorghum bicolor Sb02g005850 N 0.722
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.722
Traes_5DS_E9D675FAC Triticum aestivum Traes_5DS_E9D675FAC N 0.722
Pavir.J01563 Panicum virgatum Pavir.J01563 N 0.711
BRADI2G37795 Brachypodium distachyon BRADI2G37795 N 0.711
Traes_2DL_F37E51175 Triticum aestivum Traes_2DL_F37E51175 N 0.707
Pavir.J35278 Panicum virgatum Pavir.J35278 N 0.700
Pavir.Cb01092 Panicum virgatum Pavir.Cb01092 N 0.700