CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia02192
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Ia02192
T181765_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia02192.1.p
FAR1
26
112
QFYNAYALKKGFSVRRSYAEWDAGHNELTLRKFVCSRKHMKREDKQRRPRNITRVGCRAKFVIAQQRNMGQWYVKDFIDDHNHPLAP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Db01105
Panicum virgatum
Pavir.Db01105
N
0.826
Pavir.J05000
Panicum virgatum
Pavir.J05000
N
0.791
Pavir.Ga01170
Panicum virgatum
Pavir.Ga01170
N
0.759
Traes_5BL_FC8AB1380
Triticum aestivum
Traes_5BL_FC8AB1380
N
0.750
Pavir.Ea01242
Panicum virgatum
Pavir.Ea01242
N
0.733
Sb02g007217
Sorghum bicolor
Sb02g007217
N
0.721
Sb03g047180
Sorghum bicolor
Sb03g047180
N
0.721