Alligator_sinensis_CCG014463.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG014463.1 T069864_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFE2L1
M04008_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1 		0.925 0.937
NFE2L1
M08782_2.00 		Homo sapiens
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C 		0.925 0.937
Nfe2l1
M08831_2.00 		Mus musculus
NATGAYD
HRTCATN		 Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C 		0.925 0.937
NFE2L1
M09925_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2L1_Q5 		0.925 0.937
NFE2L1
M09926_2.00 		Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN		 Transfac
Matys et al.(2006)
V$TCF11_01 		0.925 0.937
NFE2L3
M09923_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_02 		0.853 0.683
Nfe2l2
M08077_2.00 		Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN		 ChIP-seq
Mathelier et al.(2014)
MA0150.2 		0.842 0.556
Nfe2l2
M08816_2.00 		Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A 		0.842 0.556
NFE2L2
M08789_2.00 		Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A 		0.841 0.587
NFE2L2
M09943_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q3 		0.841 0.587
NFE2L2
M09944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4_01 		0.841 0.587
NFE2L2
M09945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q4 		0.841 0.587
NFE2L2
M09946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF2_Q6 		0.841 0.587
NFE2L2
M01142_2.00 		Gallus gallus
NNRTKAYNN
NNRTMAYNN		 PBM
Lambert et al.(2019)
pTH9845 		0.840 0.619
Nfe2l3
M10031_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NRF3_01 		0.839 0.635
Nfe2
M08843_2.00 		Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A 		0.822 0.540
NFE2
M02832_2.00 		Homo sapiens
VATGACTCATB
VATGAGTCATB		 SELEX
Jolma et al.(2013)
NFE2_1 		0.818 0.540
NFE2
M04266_2.00 		Homo sapiens
VRTGASTCAYB
VRTGASTCAYB		 SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX 		0.818 0.540
NFE2
M04024_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1 		0.818 0.540
NFE2
M07813_2.00 		Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB		 ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford 		0.818 0.540
NFE2
M08793_2.00 		Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB		 Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A 		0.818 0.540
NFE2
M09486_2.00 		Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB		 Misc
Heinz et al.(2010)
K562-NFE2_GSE31477 		0.818 0.540
NFE2
M09959_2.00 		Homo sapiens
RTGASTCAGCD
HGCTGASTCAY		 Transfac
Matys et al.(2006)
V$NFE2_01 		0.818 0.540
NFE2
M09960_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_04 		0.818 0.540
NFE2
M09961_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFE2_Q6 		0.818 0.540
NFE2
M04267_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX 		0.818 0.540
FBgn0262975
M03654_2.00 		Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN		 SELEX
Nitta et al.(2015)
cnc_1 		0.797 0.508
FBgn0262975
M03655_2.00 		Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS		 SELEX
Nitta et al.(2015)
cnc_2 		0.797 0.508
FBgn0262975
M03656_2.00 		Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC		 SELEX
Nitta et al.(2015)
cnc_3 		0.797 0.508
FBgn0262975
M08189_2.00 		Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA		 ChIP-seq
Contrino et al.(2012)
Mf3 		0.797 0.508
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG014463.1 bZIP 645 707

Links

Other bZIP family TFs
Other Alligator sinensis TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198518.3_FG005 Zea mays AC198518.3_FG005 N 0.000
BGIOSGA013618 Oryza indica BGIOSGA013618 N 0.000
BGIOSGA035596 Oryza indica BGIOSGA035596 N 0.000
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N 0.000
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N 0.000
Ca_05643 Cicer arietinum Ca_05643 N 0.000
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N 0.000
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N 0.000
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N 0.000
GRMZM2G165188 Zea mays GRMZM2G165188 N 0.000
LPERR03G29580 Leersia perrieri LPERR03G29580 N 0.000
MDP0000876738 Malus domestica MDP0000876738 N 0.000
MTR_1g106470 Medicago truncatula MTR_1g106470 N 0.000
OB03G42180 Oryza brachyantha OB03G42180 N 0.000
OB11G25500 Oryza brachyantha OB11G25500 N 0.000
OBART11G20580 Oryza barthii OBART11G20580 N 0.000
OGLUM03G34950 Oryza glumaepatula OGLUM03G34950 N 0.000
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N 0.000
OLONG_003723 Oryza longistaminata OLONG_003723 N 0.000
OLONG_021754 Oryza longistaminata OLONG_021754 N 0.000
ONIVA03G36690 Oryza nivara ONIVA03G36690 N 0.000
ONIVA11G20620 Oryza nivara ONIVA11G20620 N 0.000
OPUNC03G32220 Oryza punctata OPUNC03G32220 N 0.000
OPUNC11G17200 Oryza punctata OPUNC11G17200 N 0.000
ORGLA03G0322200 Oryza glaberrima ORGLA03G0322200 N 0.000
ORGLA10G0168100 Oryza glaberrima ORGLA10G0168100 N 0.000
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N 0.000
ORUFI03G36640 Oryza rufipogon ORUFI03G36640 N 0.000
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N 0.000
OS11G0634700 Oryza sativa OS11G0634700 N 0.000
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N 0.000
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N 0.000
Pavir.Cb00430 Panicum virgatum Pavir.Cb00430 N 0.000
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N 0.000
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N 0.000
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N 0.000
Pavir.Ib03951 Panicum virgatum Pavir.Ib03951 N 0.000
PGSC0003DMG400003231 Solanum tuberosum PGSC0003DMG400003231 N 0.000
Pm021173 Prunus mume Pm021173 N 0.000
PRUPE_ppa015724mg Prunus persica PRUPE_ppa015724mg N 0.000
Sb01g014580 Sorghum bicolor Sb01g014580 N 0.000
Sb08g019780 Sorghum bicolor Sb08g019780 N 0.000
Si022813m.g Setaria italica Si022813m.g N 0.000
Si024550m.g Setaria italica Si024550m.g N 0.000
Si028242m.g Setaria italica Si028242m.g N 0.000
Si038695m.g Setaria italica Si038695m.g N 0.000
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N 0.000
Solyc10g049780.1 Solanum lycopersicum Solyc10g049780.1 N 0.000
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N 0.000
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N 0.000
TRIUR3_10349 Triticum urartu TRIUR3_10349 N 0.000