cassava41140.m1 (Manihot esculenta)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 cassava41140.m1 T070619_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.807 0.548
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.807 0.548
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.791 0.484
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.791 0.484
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41140.m1 bZIP 70 131

Links

Other bZIP family TFs
Other Manihot esculenta TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP25 Arabidopsis lyrata scaffold_502576.1 N 0.000
Bo3g032910 Brassica oleracea Bo3g032910 N 0.000
Bo4g119810 Brassica oleracea Bo4g119810 I 0.000
Bostr.0697s0074 Boechera stricta Bostr.0697s0074 I 0.000
Bra000102 Brassica rapa Bra000102 I 0.000
Bra007083 Brassica rapa Bra007083 I 0.000
Bra014802 Brassica rapa Bra014802 I 0.000
Bra024310 Brassica rapa Bra024310 I 0.000
BZIP25 Arabidopsis thaliana AT3G54620 I 0.000
Cagra.0562s0051 Capsella grandiflora Cagra.0562s0051 I 0.000
Carubv10017372m.g Capsella rubella Carubv10017372m.g I 0.000
Ca_03753 Cicer arietinum Ca_03753 I 0.000
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.000
Cla015037 Citrullus lanatus Cla015037 I 0.000
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.000
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.000
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.000
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.000
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.000
MDP0000176747 Malus domestica MDP0000176747 I 0.000
PK05128.1 Cannabis sativa PK05128.1 D 0.000
PK11472.1 Cannabis sativa PK11472.1 I 0.000
Pm020231 Prunus mume Pm020231 I 0.000
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.000
Thhalv10010426m.g Eutrema salsugineum Thhalv10010426m.g I 0.000