CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.219780
(
Cucumis sativus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cucsa.219780
T070670_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN
NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.827
0.806
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.810
0.787
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.822
0.774
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.810
0.787
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.822
0.774
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.807
0.915
ABF4
M09911_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.822
0.774
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.807
0.823
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.807
0.823
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.806
0.726
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.806
0.726
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.806
0.726
ABF1
M09906_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.806
0.726
ABF1
M09907_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.806
0.726
ABF1
M09908_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.806
0.726
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.219780.1
bZIP
329
391
VERRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQKKQREIMETQKNQVLEKMK
Cucsa.219780.2
bZIP
329
375
VERRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQKKQ
Links
Other
bZIP
family TFs
Other
Cucumis sativus
TFs
251 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_09901
Capronia epimyces
A1O3_09901
N
A1O5_05129
Cladophialophora psammophila
A1O5_05129
N
ACRE_019110
Acremonium chrysogenum
ACRE_019110
N
BBA_01981
Beauveria bassiana
BBA_01981
N
Bcin11g03650
Botrytis cinerea
Bcin11g03650
N
CH063_02883
Colletotrichum higginsianum
CH063_02883
N
CMQ_7236
Grosmannia clavigera
CMQ_7236
N
Cob_07468
Colletotrichum orbiculare
Cob_07468
N
COCC4DRAFT_18753
Bipolaris maydis
COCC4DRAFT_18753
N
COCCADRAFT_37755
Bipolaris zeicola
COCCADRAFT_37755
N
COCMIDRAFT_38152
Bipolaris oryzae
COCMIDRAFT_38152
N
COCSADRAFT_212000
Bipolaris sorokiniana
COCSADRAFT_212000
N
COCVIDRAFT_32531
Bipolaris victoriae
COCVIDRAFT_32531
N
CPUR_04455
Claviceps purpurea
CPUR_04455
N
CSUB01_03140
Colletotrichum sublineola
CSUB01_03140
N
estExt_fgenesh1_pg.C_20315
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20315
N
estExt_Genewise1Plus.C_30186
Cryphonectria parasitica
estExt_Genewise1Plus.C_30186
N
F503_05665
Ophiostoma piceae uamh
F503_05665
N
FFUJ_01093
Fusarium fujikuroi
FFUJ_01093
N
FGRRES_00574
Fusarium graminearum
FGRRES_00574
N
FOXG_00477
Fusarium oxysporum
FOXG_00477
N
FPSE_03135
Fusarium pseudograminearum
FPSE_03135
N
G647_06073
Cladophialophora carrionii
G647_06073
N
GGTG_05714
Gaeumannomyces graminis
GGTG_05714
N
GLRG_11037
Colletotrichum graminicola
GLRG_11037
N
HMPREF1120_04205
Exophiala dermatitidis
HMPREF1120_04205
N
HMPREF1624_02645
Sporothrix schenckii
HMPREF1624_02645
N
MAC_03038
Metarhizium acridum
MAC_03038
N
MAJ_00705
Metarhizium majus
MAJ_00705
N
MAM_01897
Metarhizium album
MAM_01897
N
MANI_001311
Metarhizium anisopliae
MANI_001311
N
MBM_09637
Marssonina brunnea
MBM_09637
N
MBR_03402
Metarhizium brunneum
MBR_03402
N
MGG_10528
Magnaporthe oryzae
MGG_10528
N
MGU_02792
Metarhizium guizhouense
MGU_02792
N
MYCTH_2299532
Myceliophthora thermophila
MYCTH_2299532
N
OIDMADRAFT_53431
Oidiodendron maius
OIDMADRAFT_53431
N
PFICI_01056
Pestalotiopsis fici
PFICI_01056
N
PTT_13565
Pyrenophora teres
PTT_13565
N
PV04_06869
Capronia semiimmersa
PV04_06869
N
PV05_08217
Exophiala xenobiotica
PV05_08217
N
PV07_03011
Cladophialophora immunda
PV07_03011
N
PV09_06680
Verruconis gallopava
PV09_06680
N
PV11_07148
Exophiala sideris
PV11_07148
N
S40285_00671
Stachybotrys chlorohalonata
S40285_00671
N
SETTUDRAFT_66917
Setosphaeria turcica
SETTUDRAFT_66917
N
SNOG_08898
Phaeosphaeria nodorum
SNOG_08898
N
SPBR_02702
Sporothrix brasiliensis
SPBR_02702
N
UCRNP2_5032
Neofusicoccum parvum
UCRNP2_5032
N
UV8b_4792
Ustilaginoidea virens
UV8b_4792
N
VDAG_03482
Verticillium dahliae
VDAG_03482
N
VHEMI06241
Torrubiella hemipterigena
VHEMI06241
N
W97_00259
Coniosporium apollinis
W97_00259
N
X797_003963
Metarhizium robertsii
X797_003963
N
Z517_05634
Fonsecaea pedrosoi
Z517_05634
N
Z518_05834
Rhinocladiella mackenziei
Z518_05834
N
Z519_08018
Cladophialophora bantiana
Z519_08018
N