Cagra.0483s0006 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.0483s0006 T071467_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.889 0.952
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.889 0.952
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0483s0006.1.p bZIP 22 84

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004659 Ricinus communis 30076.m004659 I 0.811
30131.m007078 Ricinus communis 30131.m007078 I 0.809
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.802
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.784
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.802
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.889
Bo3g010620 Brassica oleracea Bo3g010620 I 0.000
Bo3g010750 Brassica oleracea Bo3g010750 I 0.000
Bo6g079450 Brassica oleracea Bo6g079450 I 0.888
Bo8g097830 Brassica oleracea Bo8g097830 I 0.879
Bra003500 Brassica rapa Bra003500 I 0.888
Bra006324 Brassica rapa Bra006324 I 0.000
Bra007679 Brassica rapa Bra007679 I 0.879
Bra039631 Brassica rapa Bra039631 I 0.789
BZIP53 Arabidopsis thaliana AT3G62420 D 0.889
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.889
cassava1498.valid.m1 Manihot esculenta cassava1498.valid.m1 N 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.809
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.783
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.805
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.791
cassava42526.valid.m1 Manihot esculenta cassava42526.valid.m1 N 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
Ca_09362 Cicer arietinum Ca_09362 I 0.000
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.000
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.835
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.825
Cla022814 Citrullus lanatus Cla022814 N 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.835
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.248080 Cucumis sativus Cucsa.248080 N 0.000
Eucgr.F01867 Eucalyptus grandis Eucgr.F01867 N 0.000
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.782
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.840
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.825
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.811
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.825
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.825
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.786
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.794
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.798
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.812
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.791
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.804
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.795
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.806
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.824
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.817
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.000
Lus10024279.g Linum usitatissimum Lus10024279.g N 0.000
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.817
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.792
MDP0000205823 Malus domestica MDP0000205823 I 0.831
MDP0000239026 Malus domestica MDP0000239026 I 0.828
MDP0000863909 Malus domestica MDP0000863909 I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.802
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.816
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.835
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.000
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.785
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N 0.000
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.802
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.801
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.825
PK07533.1 Cannabis sativa PK07533.1 I 0.811
Pm002353 Prunus mume Pm002353 I 0.783
Pm015434 Prunus mume Pm015434 I 0.000
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.809
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.819
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.829
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.783
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.809
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.802
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.809
Si023562m.g Setaria italica Si023562m.g N 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.799
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.802
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.783
Solyc03g043900.1 Solanum lycopersicum Solyc03g043900.1 N 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.888
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.825
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.000