Cagra.4396s0065 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.4396s0065 T071523_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HYH
M01132_2.00 		Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN		 PBM
Lambert et al.(2019)
pTH9959 		0.859 1.000
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.4396s0065.1.p bZIP 80 144

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003420 Ricinus communis 29889.m003420 I 0.813
Bo3g069000 Brassica oleracea Bo3g069000 I 0.859
Bo5g122830 Brassica oleracea Bo5g122830 I 0.809
Bostr.19424s0909 Boechera stricta Bostr.19424s0909 I 0.859
Bra001671 Brassica rapa Bra001671 I 0.859
Bra021258 Brassica rapa Bra021258 I 0.847
Bra022225 Brassica rapa Bra022225 I 0.827
cassava328.valid.m1 Manihot esculenta cassava328.valid.m1 I 0.797
Ca_22618 Cicer arietinum Ca_22618 I 0.784
Eucgr.B02198 Eucalyptus grandis Eucgr.B02198 I 0.802
GLYMA03G18990 Glycine max GLYMA03G18990 I 0.782
GLYMA16G13570 Glycine max GLYMA16G13570 I 0.782
HYH Arabidopsis thaliana AT3G17609 D 0.859
HYH Arabidopsis lyrata fgenesh2_kg.3__1938__AT3G17609.2 I 0.859
MDP0000834642 Malus domestica MDP0000834642 I 0.783
Pm007163 Prunus mume Pm007163 I 0.790
POPTR_0010s00680 Populus trichocarpa POPTR_0010s00680 I 0.790
PRUPE_ppa011967mg Prunus persica PRUPE_ppa011967mg I 0.790
SapurV1A.0264s0450 Salix purpurea SapurV1A.0264s0450 I 0.793
SapurV1A.1258s0140 Salix purpurea SapurV1A.1258s0140 I 0.793
SapurV1A.2641s0040 Salix purpurea SapurV1A.2641s0040 I 0.793
Thhalv10021704m.g Eutrema salsugineum Thhalv10021704m.g I 0.859