CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g122830
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo5g122830
T057315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HYH
M01132_2.00
Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN
PBM
Lambert et al.(2019)
pTH9959
0.809
0.891
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g122830.1
bZIP
77
140
DKEYRRHKRLLRNRVSAQEARERKKVYVSDMESRANELQNNNDELGEKISTLMNENTMLRKMLI
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra022225
Brassica rapa
Bra022225
I
0.851
Bra021258
Brassica rapa
Bra021258
I
0.820
29889.m003420
Ricinus communis
29889.m003420
I
0.815
HYH
Arabidopsis thaliana
AT3G17609
D
0.809
Bo3g069000
Brassica oleracea
Bo3g069000
I
0.809
Bra001671
Brassica rapa
Bra001671
I
0.809
HYH
Arabidopsis lyrata
fgenesh2_kg.3__1938__AT3G17609.2
I
0.809
Bostr.19424s0909
Boechera stricta
Bostr.19424s0909
I
0.809
Cagra.4396s0065
Capsella grandiflora
Cagra.4396s0065
I
0.809
Thhalv10021704m.g
Eutrema salsugineum
Thhalv10021704m.g
I
0.809
Eucgr.B02198
Eucalyptus grandis
Eucgr.B02198
I
0.805
SapurV1A.0264s0450
Salix purpurea
SapurV1A.0264s0450
I
0.795
SapurV1A.1258s0140
Salix purpurea
SapurV1A.1258s0140
I
0.795
SapurV1A.2641s0040
Salix purpurea
SapurV1A.2641s0040
I
0.795
POPTR_0010s00680
Populus trichocarpa
POPTR_0010s00680
I
0.792
PRUPE_ppa011967mg
Prunus persica
PRUPE_ppa011967mg
I
0.792
Pm007163
Prunus mume
Pm007163
I
0.792
BRADI1G36750
Brachypodium distachyon
BRADI1G36750
I
0.787
Ca_22618
Cicer arietinum
Ca_22618
I
0.786
GLYMA03G18990
Glycine max
GLYMA03G18990
I
0.785
GLYMA16G13570
Glycine max
GLYMA16G13570
I
0.785
MDP0000834642
Malus domestica
MDP0000834642
I
0.785
Cucsa.310450
Cucumis sativus
Cucsa.310450
I
0.784
SapurV1A.0043s0530
Salix purpurea
SapurV1A.0043s0530
I
0.784
MDP0000279891
Malus domestica
MDP0000279891
N
0.783