Carubv10003520m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10003520m.g T071547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HY5
M06790_2.00 		Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH		 Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a 		0.830 1.000
HY5
M08407_2.00 		Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN		 ChIP-chip
Mathelier et al.(2014)
MA0551.1 		0.830 1.000
HY5
M09919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HY5_01 		0.830 1.000
Q39895_SOYBN
M10048_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_01 		0.830 0.869
Q39895_SOYBN
M10049_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_02 		0.830 0.869
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003520m bZIP 86 146

Links

Other bZIP family TFs
Other Capsella rubella TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_02722 Trichosporon asahii A1Q1_02722 N
A1Q1_05146 Trichosporon asahii A1Q1_05146 N
AGABI2DRAFT_214436 Agaricus bisporus AGABI2DRAFT_214436 N
BOTBODRAFT_172908 Botryobasidium botryosum BOTBODRAFT_172908 N
CERSUDRAFT_110761 Ceriporiopsis subvermispora CERSUDRAFT_110761 N
CY34DRAFT_25000 Suillus luteus CY34DRAFT_25000 N
estExt_fgeneshTM_pg.C_50362 Tremella mesenterica estExt_fgeneshTM_pg.C_50362 N
estExt_Genewise1Plus.C_10795 Heterobasidion annosum estExt_Genewise1Plus.C_10795 N
GALMADRAFT_233700 Galerina marginata GALMADRAFT_233700 N
GLOTRDRAFT_68601 Gloeophyllum trabeum GLOTRDRAFT_68601 N
HETIRDRAFT_468737 Heterobasidion irregulare HETIRDRAFT_468737 N
JAAARDRAFT_203058 Jaapia argillacea JAAARDRAFT_203058 N
K437DRAFT_132732 Tilletiaria anomala K437DRAFT_132732 N
K443DRAFT_673799 Laccaria amethystina K443DRAFT_673799 N
LACBIDRAFT_300743 Laccaria bicolor LACBIDRAFT_300743 N
M378DRAFT_155674 Amanita muscaria M378DRAFT_155674 N
M404DRAFT_134644 Pisolithus tinctorius M404DRAFT_134644 N
M407DRAFT_219867 Tulasnella calospora M407DRAFT_219867 N
M408DRAFT_325789 Serendipita vermifera M408DRAFT_325789 N
Moror_1245 Moniliophthora roreri Moror_1245 N
PaG_06601 Pseudozyma aphidis PaG_06601 N
PAN0_008d3627 Pseudozyma antarctica PAN0_008d3627 N
PAXRUDRAFT_157512 Paxillus rubicundulus PAXRUDRAFT_157512 N
PHACADRAFT_247554 Phanerochaete carnosa PHACADRAFT_247554 N
PHLGIDRAFT_83469 Phlebiopsis gigantea PHLGIDRAFT_83469 N
PHSY_000700 Pseudozyma hubeiensis PHSY_000700 N
PIIN_04099 Piriformospora indica PIIN_04099 N
PILCRDRAFT_817327 Piloderma croceum PILCRDRAFT_817327 N
PISMIDRAFT_91300 Pisolithus microcarpus PISMIDRAFT_91300 N
PLEOSDRAFT_49413 Pleurotus ostreatus PLEOSDRAFT_49413 N
SCHCODRAFT_49649 Schizophyllum commune SCHCODRAFT_49649 N
SCLCIDRAFT_108680 Scleroderma citrinum SCLCIDRAFT_108680 N
SERLA73DRAFT_49851 Serpula lacrymans SERLA73DRAFT_49851 N
sr13281 Sporisorium reilianum sr13281 N
UM02061 Ustilago maydis UM02061 N
V565_027830 Rhizoctonia solani V565_027830 N