Pavir.Hb01807 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Hb01807 T072414_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA10
M06783_2.00 		Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN		 Dap-seq
OMalley et al.(2016)
TGA10_col_a 		0.794 0.848
TGA10
M06784_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA10_colamp_a 		0.794 0.848
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb01807.1.p bZIP 171 219
Pavir.Hb01807.2.p bZIP 170 218
Pavir.Hb01807.3.p bZIP 170 218
Pavir.Hb01807.4.p bZIP 171 219

Links

Other bZIP family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_10773 Exophiala aquamarina A1O9_10773 I
BBA_08083 Beauveria bassiana BBA_08083 I
CCM_01116 Cordyceps militaris CCM_01116 I
CFIO01_07294 Colletotrichum fioriniae CFIO01_07294 N
CGGC5_8357 Colletotrichum gloeosporioides CGGC5_8357 I
CH063_06329 Colletotrichum higginsianum CH063_06329 I
Cob_01730 Colletotrichum orbiculare Cob_01730 N
CPUR_03208 Claviceps purpurea CPUR_03208 I
estExt_fgenesh1_kg.C_40256 Cryphonectria parasitica estExt_fgenesh1_kg.C_40256 N
FFUJ_01501 Fusarium fujikuroi FFUJ_01501 I
FGRRES_01307 Fusarium graminearum FGRRES_01307 I
FOXG_00080 Fusarium oxysporum FOXG_00080 I
FPSE_01403 Fusarium pseudograminearum FPSE_01403 I
FVEG_01436 Fusarium verticillioides FVEG_01436 I
GLRG_03872 Colletotrichum graminicola GLRG_03872 N
HMPREF1541_08750 Cyphellophora europaea HMPREF1541_08750 N
LEMA_P050050.1 Leptosphaeria maculans LEMA_P050050.1 I
MYCTH_2088766 Myceliophthora thermophila MYCTH_2088766 N
OCS_06442 Ophiocordyceps sinensis OCS_06442 I
PV06_10058 Exophiala oligosperma PV06_10058 I
PV10_08565 Exophiala mesophila PV10_08565 N
SNOG_15057 Phaeosphaeria nodorum SNOG_15057 I
SNOG_15057 Stagonospora nodorum SNOG_15057 I
THITE_2113068 Thielavia terrestris THITE_2113068 I
TRIATDRAFT_148632 Trichoderma atroviride TRIATDRAFT_148632 I
TRIREDRAFT_58130 Trichoderma reesei TRIREDRAFT_58130 I
TRIVIDRAFT_173998 Trichoderma virens TRIVIDRAFT_173998 I
UCREL1_1818 Eutypa lata UCREL1_1818 I
UCRPA7_7634 Togninia minima UCRPA7_7634 N
VDAG_08823 Verticillium dahliae VDAG_08823 N
VDBG_05122 Verticillium alfalfae VDBG_05122 N
VDBG_05122 Verticillium albo atrum VDBG_05122 N
VHEMI02386 Torrubiella hemipterigena VHEMI02386 I
W97_00703 Coniosporium apollinis W97_00703 I