Pavir.J36143 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J36143 T072496_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.787 0.492
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.787 0.492
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.787 0.492
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.784 0.667
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J36143.1.p bZIP 59 121

Links

Other bZIP family TFs
Other Panicum virgatum TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009185 Calypte anna Aan_R009185 I
Afo_R007523 Aptenodytes forsteri Afo_R007523 I
Alligator_sinensis_CCG009047.1 Alligator sinensis Alligator_sinensis_CCG009047.1 I
Brh_R003401 Buceros rhinoceros Brh_R003401 I
Cmyd_10016754 Chelonia mydas Cmyd_10016754 I
ENSAMEG00000001273 Ailuropoda melanoleuca ENSAMEG00000001273 I
ENSAMXG00000015046 Astyanax mexicanus ENSAMXG00000015046 I
ENSAPLG00000006256 Anas platyrhynchos ENSAPLG00000006256 I
ENSCSAG00000002787 Chlorocebus sabaeus ENSCSAG00000002787 I
ENSDORG00000012257 Dipodomys ordii ENSDORG00000012257 I
ENSEEUG00000012574 Erinaceus europaeus ENSEEUG00000012574 I
ENSETEG00000007978 Echinops telfairi ENSETEG00000007978 I
ENSFALG00000003070 Ficedula albicollis ENSFALG00000003070 I
ENSGMOG00000003784 Gadus morhua ENSGMOG00000003784 I
ENSLOCG00000002928 Lepisosteus oculatus ENSLOCG00000002928 I
ENSMEUG00000001901 Macropus eugenii ENSMEUG00000001901 I
ENSMMUP00000003371 Macaca fascicularis ENSMMUP00000003371 I
ENSMPUG00000007237 Mustela putorius furo ENSMPUG00000007237 I
ENSNLEG00000015731 Nomascus leucogenys ENSNLEG00000015731 I
ENSOARG00000014354 Ovis aries ENSOARG00000014354 I
ENSONIG00000010959 Oreochromis niloticus ENSONIG00000010959 I
ENSP00000415836-D1 Bos grunniens ENSP00000415836-D1 I
ENSPANG00000022228 Papio anubis ENSPANG00000022228 I
ENSPFOG00000011742 Poecilia formosa ENSPFOG00000011742 I
ENSPPYG00000007673 Pongo abelii ENSPPYG00000007673 I
ENSPSIG00000009997 Pelodiscus sinensis ENSPSIG00000009997 I
ENSSHAG00000006045 Sarcophilus harrisii ENSSHAG00000006045 I
ENSSTOG00000013982 Ictidomys tridecemlineatus ENSSTOG00000013982 I
ENSXMAG00000002903 Xiphophorus maculatus ENSXMAG00000002903 I
Gfo_R000535 Geospiza fortis Gfo_R000535 I
Myotis_brandtii_ZNF276_10003797 Myotis brandtii Myotis_brandtii_ZNF276_10003797 I
Ogr16798 Ophisaurus gracilis Ogr16798 I
Pvit_16300 Pogona vitticeps Pvit_16300 I
Zfp276 Mus musculus ENSMUSG00000001065 I
Zfp276 Rattus norvegicus ENSRNOG00000016631 I
ZNF276 Sus scrofa ENSSSCG00000029228 I
ZNF276 Sorex araneus ENSSARG00000003731 I
ZNF276 Oryctolagus cuniculus ENSOCUG00000008960 I
ZNF276 Takifugu rubripes ENSTRUG00000005087 I
znf276 Xenopus tropicalis XB-GENE-983669 I
ZNF276 Taeniopygia guttata ENSTGUG00000007961 I
ZNF276 Tursiops truncatus ENSTTRG00000004416 I
ZNF276 Tetraodon nigroviridis ENSTNIG00000008839 I
ZNF276 Procavia capensis ENSPCAG00000001610 I
ZNF276 Bos taurus ENSBTAG00000001904 I
ZNF276 Canis familiaris ENSCAFG00000019816 I
ZNF276 Callithrix jacchus ENSCJAG00000010721 I
ZNF276 Dasypus novemcinctus ENSDNOG00000001856 I
ZNF276 Equus caballus ENSECAG00000019563 I
ZNF276 Felis catus ENSFCAG00000003794 I
ZNF276 Homo sapiens ENSG00000158805 D
ZNF276 Gasterosteus aculeatus ENSGACG00000002104 I
ZNF276 Gallus gallus ENSGALG00000000513 I
ZNF276 Gorilla gorilla ENSGGOG00000010960 I
ZNF276 Loxodonta africana ENSLAFG00000018198 I
ZNF276 Meleagris gallopavo ENSMGAG00000008195 I
ZNF276 Microcebus murinus ENSMICG00000003291 I
ZNF276 Myotis lucifugus ENSMLUG00000013641 I
ZNF276 Macaca mulatta ENSMMUG00000002506 I
ZNF276 Monodelphis domestica ENSMODG00000003479 I
ZNF276 Ornithorhynchus anatinus ENSOANG00000004837 I
ZNF276 Anolis carolinensis ENSACAG00000008103 I
ZNF276 Otolemur garnettii ENSOGAG00000004891 I
ZNF276 Ochotona princeps ENSOPRG00000016172 I
ZNF276 Oryzias latipes ENSORLG00000015289 I
ZNF276 Pan troglodytes ENSPTRG00000008487 I
znf276.S Xenopus laevis XB-GENE-983672 I