CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10004701m.g
(
Eutrema salsugineum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Thhalv10004701m.g
T072635_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.785
0.613
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004701m
bZIP
136
197
NDLKRIRRMYSNRESARRSRRRKQEHLADLESQVDSLKGENSTLYKQLIDAAQQFRSAGTNN
Links
Other
bZIP
family TFs
Other
Eutrema salsugineum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP9
Arabidopsis lyrata
scaffold_602583.1
N
0.839
Bo2g159200
Brassica oleracea
Bo2g159200
N
0.849
Bo7g096540
Brassica oleracea
Bo7g096540
N
0.783
Bostr.5763s0039
Boechera stricta
Bostr.5763s0039
N
0.803
Bra009793
Brassica rapa
Bra009793
N
0.836
Bra020471
Brassica rapa
Bra020471
N
0.849
BZIP9
Arabidopsis thaliana
AT5G24800
N
0.839
Cagra.0622s0012
Capsella grandiflora
Cagra.0622s0012
N
0.906
Carubv10001471m.g
Capsella rubella
Carubv10001471m.g
N
0.906
Ca_03753
Cicer arietinum
Ca_03753
I
0.785
Ciclev10008515m.g
Citrus clementina
Ciclev10008515m.g
I
0.803
Ciclev10020133m.g
Citrus clementina
Ciclev10020133m.g
I
0.784
Cla020112
Citrullus lanatus
Cla020112
I
0.785
Cla022576
Citrullus lanatus
Cla022576
I
0.782
Cucsa.133290
Cucumis sativus
Cucsa.133290
I
0.785
Cucsa.161540
Cucumis sativus
Cucsa.161540
I
0.782
Cucsa.289120
Cucumis sativus
Cucsa.289120
I
0.787
Eucgr.C03986
Eucalyptus grandis
Eucgr.C03986
I
0.796
evm.TU.supercontig_244.3
Carica papaya
evm.TU.supercontig_244.3
N
0.801
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.785
gene08757-v1.0-hybrid
Fragaria vesca
gene08757-v1.0-hybrid
I
0.809
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
0.785
orange1.1g013166m.g
Citrus sinensis
orange1.1g013166m.g
I
0.784
orange1.1g015739m.g
Citrus sinensis
orange1.1g015739m.g
I
0.803
PK05128.1
Cannabis sativa
PK05128.1
D
0.785
VIT_07s0141g00170
Vitis vinifera
VIT_07s0141g00170
I
0.783