CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK27149.1
(
Cannabis sativa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PK27149.1
T072907_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27149.1
M01164_2.00
Cannabis sativa
TBACGTGK
MCACGTVA
PBM
Lambert et al.(2019)
pTH11283
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01164_2.00
bZIP
25
86
DERKLRRMISNRESARRSRWRKKRHLEELTEQVNQLKAENRDLKNRLGHMAQQCHVAWTEND
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK27149.1
bZIP
25
86
DERKLRRMISNRESARRSRWRKKRHLEELTEQVNQLKAENRDLKNRLGHMAQQCHVAWTEND
Links
Other
bZIP
family TFs
Other
Cannabis sativa
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30170.m013679
Ricinus communis
30170.m013679
I
0.897
cassava22418.valid.m1
Manihot esculenta
cassava22418.valid.m1
I
0.822
cassava8864.m1
Manihot esculenta
cassava8864.m1
I
0.873
Ciclev10002805m.g
Citrus clementina
Ciclev10002805m.g
I
0.833
Cla010123
Citrullus lanatus
Cla010123
I
0.801
Cla022990
Citrullus lanatus
Cla022990
I
0.817
Cucsa.353000
Cucumis sativus
Cucsa.353000
I
0.801
Cucsa.395470
Cucumis sativus
Cucsa.395470
I
0.822
gene02614-v1.0-hybrid
Fragaria vesca
gene02614-v1.0-hybrid
I
0.877
Lus10018662.g
Linum usitatissimum
Lus10018662.g
I
0.787
MDP0000140166
Malus domestica
MDP0000140166
I
0.879
MDP0000200822
Malus domestica
MDP0000200822
I
0.879
orange1.1g039918m.g
Citrus sinensis
orange1.1g039918m.g
I
0.833
POPTR_0002s11660
Populus trichocarpa
POPTR_0002s11660
I
0.878
POPTR_0014s01390
Populus trichocarpa
POPTR_0014s01390
I
0.879
SapurV1A.0004s0180
Salix purpurea
SapurV1A.0004s0180
I
0.833
SapurV1A.3851s0010
Salix purpurea
SapurV1A.3851s0010
I
0.833