CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA033523
(
Oryza indica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BGIOSGA033523
T081553_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA033523-PA
C2H2 ZF
72
94
FECRTCGRRFPSHQALGGHRTSH
BGIOSGA033523-PA
C2H2 ZF
112
134
HACEVCGLGFQMGQALGGHMRRH
Links
Other
C2H2 ZF
family TFs
Other
Oryza indica
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g146500
Brassica oleracea
Bo2g146500
N
0.000
Bo7g086990
Brassica oleracea
Bo7g086990
N
0.000
Bo9g008670
Brassica oleracea
Bo9g008670
N
0.000
Bostr.10058s0009
Boechera stricta
Bostr.10058s0009
N
0.000
Bra025358
Brassica rapa
Bra025358
N
0.000
Bra028443
Brassica rapa
Bra028443
N
0.000
Bra033063
Brassica rapa
Bra033063
N
0.000
Gorai.005G139900
Gossypium raimondii
Gorai.005G139900
N
0.000
PRE1
Arabidopsis thaliana
AT5G39860
N
0.000
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.000
PRE5
Arabidopsis thaliana
AT3G28857
N
0.000
scaffold_500871.1
Arabidopsis lyrata
scaffold_500871.1
N
0.000
Thhalv10005197m.g
Eutrema salsugineum
Thhalv10005197m.g
N
0.000
Thhalv10028074m.g
Eutrema salsugineum
Thhalv10028074m.g
N
0.000