Bra014483 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra014483 T081912_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.803 0.957
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.803 0.935
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.802 0.913
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.775 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra014483.1-P C2H2 ZF 152 174
Bra014483.1-P C2H2 ZF 197 219

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I
1735_Multiple Saccharomyces paradoxus 1735_Multiple I
21954_YPL089C Saccharomyces mikatae 21954_YPL089C I
25226_YPL089C Saccharomyces bayanus 25226_YPL089C I
572_YBR182C Saccharomyces mikatae 572_YBR182C I
ACLA_036490 Aspergillus clavatus CADACLAG00003970 I
AFUA_3G08520 Aspergillus fumigatus CADAFUAG00005633 I
AGOS_AGR198C Ashbya gossypii AGOS_AGR198C I
ANIA_02984 Aspergillus nidulans CADANIAG00010096 I
ATEG_01619 Aspergillus terreus CADATEAG00002690 I
BOTBODRAFT_121202 Botryobasidium botryosum BOTBODRAFT_121202 I
CADAFLAG00001438 Aspergillus flavus CADAFLAG00001438 I
CADANGAG00002744 Aspergillus niger CADANGAG00002744 I
CADAORAG00003304 Aspergillus oryzae CADAORAG00003304 I
CAGL0H05621g Candida glabrata CAGL0H05621g I
CAGL0M06325g Candida glabrata CAGL0M06325g N
CANTEDRAFT_125008 Candida tenuis CANTEDRAFT_125008 I
CaO19.12132 Candida albicans CaO19.12132 I
CaO19.4662 Candida albicans CaO19.4662 I
CD36_41250 Candida dubliniensis CD36_41250 I
CLUG_04340 Candida lusitaniae CLUG_04340 I
CLUG_04340 Clavispora lusitaniae CLUG_04340 I
CORT_0E04370 Candida orthopsilosis CORT_0E04370 I
CPAG_01728 Candida parapsilosis CPAG_01728 I
CTRG_00027 Candida tropicalis CTRG_00027 I
DEHA2B02882g Debaryomyces hansenii DEHA2B02882g I
Ecym_7060 Eremothecium cymbalariae Ecym_7060 I
estExt_genewise1_human.C_chr_1.10329 Pichia stipitis estExt_genewise1_human.C_chr_1.10329 I
EURHEDRAFT_408541 Aspergillus ruber EURHEDRAFT_408541 I
fgenesh1_pm.00866_#_723 Aspergillus carbonarius fgenesh1_pm.00866_#_723 I
G210_1171 Candida maltosa G210_1171 I
GNLVRS01_PISO0M22936g Millerozyma farinosa GNLVRS01_PISO0M22936g I
GNLVRS01_PISO0N23201g Millerozyma farinosa GNLVRS01_PISO0N23201g I
HPODL_00493 Ogataea parapolymorpha HPODL_00493 I
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I
KAFR_0I00730 Kazachstania africana KAFR_0I00730 I
KLLA0_E24025g Kluyveromyces lactis KLLA0_E24025g I
KLTH0E13156g Lachancea thermotolerans KLTH0E13156g I
KLTH0E13156g Kluyveromyces thermotolerans KLTH0E13156g I
KNAG_0A01830 Kazachstania naganishii KNAG_0A01830 I
Kpol_1048p48 Vanderwaltozyma polyspora Kpol_1048p48 I
Kpol_397p4 Vanderwaltozyma polyspora Kpol_397p4 I
KUCA_T00000739001 Kuraishia capsulata KUCA_T00000739001 I
LALA0_S04e02938g Lachancea lanzarotensis LALA0_S04e02938g I
LELG_04554 Lodderomyces elongisporus LELG_04554 I
Mycgr3G71585 Zymoseptoria tritici Mycgr3G71585 I
NCAS_0B02030 Naumovozyma castellii NCAS_0B02030 I
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I
NDAI_0C05650 Naumovozyma dairenensis NDAI_0C05650 N
NDAI_0E02700 Naumovozyma dairenensis NDAI_0E02700 I
NFIA_068610 Neosartorya fischeri CADNFIAG00006321 I
PAS_chr4_0093 Komagataella pastoris PAS_chr4_0093 I
PGUG_02571 Meyerozyma guilliermondii PGUG_02571 I
PGUG_02571 Candida guilliermondii PGUG_02571 I
PICST_68747 Scheffersomyces stipitis PICST_68747 I
RLM1 Saccharomyces cerevisiae YPL089C D
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I
SBOR_4659 Sclerotinia borealis SBOR_4659 I
Scas_Contig664.4 Saccharomyces castellii Scas_Contig664.4 I
Scas_Contig721.17 Saccharomyces castellii Scas_Contig721.17 I
Scas_Contig721.18 Saccharomyces castellii Scas_Contig721.18 I
SEPMUDRAFT_148874 Sphaerulina musiva SEPMUDRAFT_148874 I
SKUD_178506 Saccharomyces kudriavzevii SKUD_178506 I
SKUD_205813 Saccharomyces kudriavzevii SKUD_205813 I
SMP1 Saccharomyces cerevisiae YBR182C D
SU7_0243 Saccharomyces arboricola SU7_0243 I
SU7_3566 Saccharomyces arboricola SU7_3566 I
TBLA_0B04500 Tetrapisispora blattae TBLA_0B04500 N
TBLA_0H03770 Tetrapisispora blattae TBLA_0H03770 I
TPHA_0A01340 Tetrapisispora phaffii TPHA_0A01340 I
XP_002493499.1 Pichia pastoris XP_002493499.1 I
ZYRO0A13464g Zygosaccharomyces rouxii ZYRO0A13464g I