Bra018060 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra018060 T081921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
REF6
M08081_2.00
Arabidopsis thaliana
DNCTCTGTTTY

RAAACAGAGNH
ChIP-seq
Mathelier et al.(2014)
MA1415.1
0.812 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018060.1-P C2H2 ZF 1268 1291
Bra018060.1-P C2H2 ZF 1292 1315
Bra018060.1-P C2H2 ZF 1321 1345
Bra018060.1-P C2H2 ZF 1351 1377

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action