ENSAMXG00000018733 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000018733 T087384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.792 0.841
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.792 0.841
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.792 0.841
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.792 0.841
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.788 0.823
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.788 0.823
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.788 0.823
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.785 0.885
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.785 0.885
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.785 0.885
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.785 0.885
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.784 0.867
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.784 0.867
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.784 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000019287 C2H2 ZF 179 201
ENSAMXP00000019287 C2H2 ZF 211 232
ENSAMXP00000019287 C2H2 ZF 236 258
ENSAMXP00000019287 C2H2 ZF 264 286
ENSAMXP00000019287 C2H2 ZF 292 313

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012711 Calypte anna Aan_R012711 I 0.000
Afo_R003947 Aptenodytes forsteri Afo_R003947 I 0.000
Alligator_sinensis_CCG019192.1 Alligator sinensis Alligator_sinensis_CCG019192.1 I 0.000
ENSAMEG00000002034 Ailuropoda melanoleuca ENSAMEG00000002034 I 0.000
ENSAPLG00000007481 Anas platyrhynchos ENSAPLG00000007481 I 0.000
ENSCSAG00000012570 Chlorocebus sabaeus ENSCSAG00000012570 I 0.000
ENSFALG00000008628 Ficedula albicollis ENSFALG00000008628 I 0.000
ENSLOCG00000007120 Lepisosteus oculatus ENSLOCG00000007120 I 0.000
ENSMMUP00000038685 Macaca fascicularis ENSMMUP00000038685 I 0.000
ENSMPUG00000017089 Mustela putorius furo ENSMPUG00000017089 I 0.000
ENSNLEG00000005059 Nomascus leucogenys ENSNLEG00000005059 I 0.000
ENSOARG00000000757 Ovis aries ENSOARG00000000757 I 0.000
ENSP00000326240-D1 Bos grunniens ENSP00000326240-D1 I 0.000
ENSPANG00000026081 Papio anubis ENSPANG00000026081 I 0.000
ENSPPYG00000014280 Pongo abelii ENSPPYG00000014280 I 0.000
ENSPSIG00000004647 Pelodiscus sinensis ENSPSIG00000004647 I 0.000
ENSSHAG00000016096 Sarcophilus harrisii ENSSHAG00000016096 I 0.000
ENSSTOG00000004642 Ictidomys tridecemlineatus ENSSTOG00000004642 I 0.000
Gfo_R004538 Geospiza fortis Gfo_R004538 I 0.000
MYNN Tupaia belangeri ENSTBEG00000007630 I 0.000
MYNN Sus scrofa ENSSSCG00000026829 I 0.000
MYNN Taeniopygia guttata ENSTGUG00000010998 I 0.000
Mynn Rattus norvegicus ENSRNOG00000027923 I 0.000
MYNN Vicugna pacos ENSVPAG00000007981 I 0.000
MYNN Pan troglodytes ENSPTRG00000015605 I 0.000
MYNN Oryctolagus cuniculus ENSOCUG00000003252 I 0.000
MYNN Anolis carolinensis ENSACAG00000015699 I 0.000
MYNN Canis familiaris ENSCAFG00000014700 I 0.000
MYNN Callithrix jacchus ENSCJAG00000002629 I 0.000
MYNN Cavia porcellus ENSCPOG00000011640 I 0.000
MYNN Dasypus novemcinctus ENSDNOG00000004681 I 0.000
MYNN Equus caballus ENSECAG00000016427 I 0.000
MYNN Felis catus ENSFCAG00000000505 I 0.000
MYNN Homo sapiens ENSG00000085274 D 0.000
MYNN Gallus gallus ENSGALG00000009409 I 0.000
MYNN Gorilla gorilla ENSGGOG00000022638 I 0.000
MYNN Meleagris gallopavo ENSMGAG00000010294 I 0.000
MYNN Macaca mulatta ENSMMUG00000021875 I 0.000
MYNN Monodelphis domestica ENSMODG00000016120 I 0.000
Mynn Mus musculus ENSMUSG00000037730 I 0.000
MYNN Ornithorhynchus anatinus ENSOANG00000010325 I 0.000
MYNN Otolemur garnettii ENSOGAG00000004734 I 0.000
mynn.L Xenopus laevis XB-GENE-941014 I 0.000
Myotis_brandtii_MYNN_10024775 Myotis brandtii Myotis_brandtii_MYNN_10024775 I 0.000
Pvit_09122 Pogona vitticeps Pvit_09122 I 0.000
XP_002931590 Xenopus tropicalis XP_002931590 I 0.000