ENSAPLG00000006283 (Anas platyrhynchos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAPLG00000006283 T087555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000005871 C2H2 ZF 429 450
ENSAPLP00000005871 C2H2 ZF 456 478
ENSAPLP00000005871 C2H2 ZF 773 795
ENSAPLP00000005871 C2H2 ZF 801 823
ENSAPLP00000005871 C2H2 ZF 831 854

Links

Other C2H2 ZF family TFs
Other Anas platyrhynchos TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000577 Aedes aegypti AAEL000577 I
ACEP20141 Atta cephalotes ACEP20141 I
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N
Cflo_10585--XP_394553.3_APIME Camponotus floridanus Cflo_10585--XP_394553.3_APIME I
CLEC003471 Cimex lectularius CLEC003471 I
GA30279 Drosophila pseudoobscura FBgn0263821 I
GD11322 Drosophila simulans FBgn0183071 I
GG21828 Drosophila erecta FBgn0114006 I
GH22029 Drosophila grimshawi FBgn0129490 I
GK22232 Drosophila willistoni FBgn0224217 I
GL17227 Drosophila persimilis FBgn0154830 I
GM21828 Drosophila sechellia FBgn0176705 I
grh Drosophila melanogaster FBgn0259211 D
grh Drosophila yakuba FBgn0067967 I
Hsal_11404--XP_394553.3_APIME Harpegnathos saltator Hsal_11404--XP_394553.3_APIME I
ISCW008081 Ixodes scapularis ISCW008081 I
KGM_04625 Danaus plexippus KGM_04625 I
MCINX002723 Melitaea cinxia MCINX002723 I
MDOA000476 Musca domestica MDOA000476 I
MhA1_Contig3342.frz3.fgene1 Meloidogyne hapla MhA1_Contig3342.frz3.fgene1 I
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I
NV11321 Nasonia vitripennis NV11321 I
RPRC012881 Rhodnius prolixus RPRC012881 I
SINV20218 Solenopsis invicta SINV20218 I
TC004589 Tribolium castaneum TC004589 I
YQE_09165 Dendroctonus ponderosae YQE_09165 I