CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAG00000013213
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000013213
T087875_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.827
1.000
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN
NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.811
0.986
Osr1
M01174_2.00
Mus musculus
GCTACYGT
ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.811
0.986
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.811
0.986
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.811
0.986
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.770
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000017584
C2H2 ZF
172
194
FICKFCGRHFTKSYNLLIHERTH
ENSBTAP00000017584
C2H2 ZF
200
222
YTCDICHKAFRRQDHLRDHRYIH
ENSBTAP00000017584
C2H2 ZF
228
250
FKCQECGKGFCQSRTLAVHKTLH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin108622
Clonorchis sinensis
csin108622
N
0.000
D915_04683
Fasciola hepatica
D915_04683
N
0.000
ECANG7_03959
Echinococcus canadensis
ECANG7_03959
N
0.000
ECPE_0000538001
Echinostoma caproni
ECPE_0000538001
N
0.000
EmuJ_000703400
Echinococcus multilocularis
EmuJ_000703400
N
0.000
SCUD_0000782801
Schistosoma curassoni
SCUD_0000782801
N
0.000
Sjc_0054530
Schistosoma japonicum
Sjc_0054530
N
0.000
Smp_162760
Schistosoma mansoni
Smp_162760
N
0.000
SMTD_0000609001
Schistosoma mattheei
SMTD_0000609001
N
0.000
T265_07444
Opisthorchis viverrini
T265_07444
N
0.000
TsM_000259000
Taenia solium
TsM_000259000
N
0.000