CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:dkey-7j22.2
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000097091
T091409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000128664
C2H2 ZF
66
88
FTCTQCGKSFGRKHNLKIHMRIH
ENSDARP00000128664
C2H2 ZF
94
116
YTCNQCGKSFNQSSNLYNHMMIH
ENSDARP00000128664
C2H2 ZF
122
144
FKCTQCGKSFNRSSDLHQHMRIH
ENSDARP00000128664
C2H2 ZF
150
172
FTCSQCGKSFYCSSHLHQHMRIH
ENSDARP00000128664
C2H2 ZF
178
200
FTCSQCGKSFRQSSNFKQHMRIH
ENSDARP00000128664
C2H2 ZF
206
217
FTCTQCGKSFNQ
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G78230
Brachypodium distachyon
BRADI1G78230
N
F775_07767
Aegilops tauschii
F775_07767
N
GRMZM2G079470
Zea mays
GRMZM2G079470
N
MLOC_72502
Hordeum vulgare
MLOC_72502
N
OGLUM10G17950
Oryza glumaepatula
OGLUM10G17950
N
OMERI10G14420
Oryza meridionalis
OMERI10G14420
N
ONIVA10G20420
Oryza nivara
ONIVA10G20420
N
OPUNC10G16180
Oryza punctata
OPUNC10G16180
N
ORUFI10G19060
Oryza rufipogon
ORUFI10G19060
N
OS10G0551200
Oryza sativa
OS10G0551200
N
Pavir.Ia02417
Panicum virgatum
Pavir.Ia02417
N
Pavir.Ib02102
Panicum virgatum
Pavir.Ib02102
N
Sb01g029650
Sorghum bicolor
Sb01g029650
N
Sb01g050333
Sorghum bicolor
Sb01g050333
N