CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM10G17950
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM10G17950
T200723_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM10G17950.1
GRAS
296
658
AVEQLAEAAKLAEAGDAFGAREILARLNYRLPAAPTAGTPLLRSAFYFKEALRLALSPTGDAPAPSASTPYDVVVKLGAYKAFSEVSPVLQFAHLTCVQAVLDELGGAGCIHVLDFDIGMGEQWASLMQELAQRRPAAALKVTALVSPASHHPLELQLIHENLSGFAAELGVFFHFTVFNIDTLDPAELLAIATAGDAVAVHLPVGPAHAAATPAVLRLVKRLGAKVVVSVDRGCDRSDLPFAAHLFHSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVARHRAASAMDKAPPPPWRAAFAAAGFAPVQATTFAESQAESLLSKVHVRGFRVEKRAGSLCLYWQRGELVSVSAWR
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA10G20420
Oryza nivara
ONIVA10G20420
N
0.994
ORUFI10G19060
Oryza rufipogon
ORUFI10G19060
N
0.992
OMERI10G14420
Oryza meridionalis
OMERI10G14420
N
0.961
OS10G0551200
Oryza sativa
OS10G0551200
N
0.955
OPUNC10G16180
Oryza punctata
OPUNC10G16180
N
0.913
ORGLA10G0130100
Oryza glaberrima
ORGLA10G0130100
N
0.913
MLOC_72502
Hordeum vulgare
MLOC_72502
N
0.810
F775_07767
Aegilops tauschii
F775_07767
N
0.807
BGIOSGA031446
Oryza indica
BGIOSGA031446
N
0.792
Pavir.Ib02102
Panicum virgatum
Pavir.Ib02102
N
0.774
Pavir.Ia02417
Panicum virgatum
Pavir.Ia02417
N
0.760
Sb01g029650
Sorghum bicolor
Sb01g029650
N
0.757
Si039098m.g
Setaria italica
Si039098m.g
N
0.757
GRMZM2G079470
Zea mays
GRMZM2G079470
N
0.749
BRADI3G32890
Brachypodium distachyon
BRADI3G32890
N
0.747
BRADI1G78230
Brachypodium distachyon
BRADI1G78230
N
0.726