CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA031446
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA031446
T199889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA031446-PA
GRAS
295
390
AVEQLAEAAKLAEAGDAFGAREILARLNYRLPAAPTAGTPLLRSAFYFKEALRLALSPTGDAPAPSASTPYDVVVKLGAYKAFSEVSPPHAAFFGA
BGIOSGA031446-PA
GRAS
442
804
AVEQLAEAAKLAEAGDAFGAREILARLNYRLPAAPTAGTPLLRSAFYFKEALRLALSPTGDAPAPSASTPYDVVVKLGAYKAFSEVSPVLQFAHLTCVQAVLDELGGAGCIHVLDFDIGMGEQWASLMQELAQLRPAAALKVTALVSPASHHPLELQLIHENLSGFAAELGVFFHFTVFNIDTLDPAELLAIATAGDAVAVHLPVGPAHAAATPAVLRLVKRLGAKVVVSVDRGCDRSDLPFAAHLFHSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVARHRAASAMDKAPPPPWRAAFAAAGFAPVQATTFAESQAESLLSKVHVRGFRVEKRAGSLCLYWQRGELVSVSAWR
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM10G17950
Oryza glumaepatula
OGLUM10G17950
N
0.792
ONIVA10G20420
Oryza nivara
ONIVA10G20420
N
0.792
ORUFI10G19060
Oryza rufipogon
ORUFI10G19060
N
0.789
TRAES3BF091600190CFD_g
Triticum aestivum
TRAES3BF091600190CFD_g
N
0.766
OMERI10G14420
Oryza meridionalis
OMERI10G14420
N
0.761
OS10G0551200
Oryza sativa
OS10G0551200
N
0.761
OPUNC10G16180
Oryza punctata
OPUNC10G16180
N
0.723
ORGLA10G0130100
Oryza glaberrima
ORGLA10G0130100
N
0.723