CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA10G0130100
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA10G0130100
T200972_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA10G0130100.1
GRAS
35
376
AVEQLAEAAKLAEAGDAFGAREILARLNYRLPAAPTAGTPLLRSAFYFKEALRLALSPTGDAPAPSASTPYDVVVKLGAYKAFSEVSPVLQFAHLTCVQAVLDELGGAGCIHVLDFDIGMGEQWASLMQELAQRRPAAALKVTALVSPASHHPLELQLIHENLSGFAAELGVFFHFTVFNIDTLDPAELLAIATAGDAVAVHLPVGPAHAAATPAVLRLVKRLGAKVVVSVDRGCDRSDLPFAAHLFHSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVARHRAASAMDKAPPPPWRAAFAAAGFAPVQATTFAESQAESLLSKLLPLPVLEMQ
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM10G17950
Oryza glumaepatula
OGLUM10G17950
N
0.913
ONIVA10G20420
Oryza nivara
ONIVA10G20420
N
0.908
ORUFI10G19060
Oryza rufipogon
ORUFI10G19060
N
0.905
OMERI10G14420
Oryza meridionalis
OMERI10G14420
N
0.874
OS10G0551200
Oryza sativa
OS10G0551200
N
0.871
OPUNC10G16180
Oryza punctata
OPUNC10G16180
N
0.829
MLOC_72502
Hordeum vulgare
MLOC_72502
N
0.741
F775_07767
Aegilops tauschii
F775_07767
N
0.735
BGIOSGA031446
Oryza indica
BGIOSGA031446
N
0.723
Pavir.Ib02102
Panicum virgatum
Pavir.Ib02102
N
0.711
Sb01g050333
Sorghum bicolor
Sb01g050333
N
0.704
Pavir.Ia02417
Panicum virgatum
Pavir.Ia02417
N
0.701