PATZ1 (Gallus gallus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGALG00000006934 T095875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.824 0.985
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.824 0.985
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000011217 C2H2 ZF 295 317
ENSGALP00000011217 C2H2 ZF 359 380
ENSGALP00000011217 C2H2 ZF 386 408
ENSGALP00000011217 C2H2 ZF 416 439
ENSGALP00000011217 C2H2 ZF 445 467
ENSGALP00000011217 C2H2 ZF 499 521

Links

Other C2H2 ZF family TFs
Other Gallus gallus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008287 Calypte anna Aan_R008287 I 0.825
Afo_R009044 Aptenodytes forsteri Afo_R009044 I 0.825
Brh_R010628 Buceros rhinoceros Brh_R010628 I 0.825
ENSAMEG00000007074 Ailuropoda melanoleuca ENSAMEG00000007074 I 0.824
ENSAPLG00000003934 Anas platyrhynchos ENSAPLG00000003934 I 0.825
ENSFALG00000007450 Ficedula albicollis ENSFALG00000007450 I 0.825
ENSLACG00000016839 Latimeria chalumnae ENSLACG00000016839 I 0.789
ENSMEUG00000016293 Macropus eugenii ENSMEUG00000016293 I 0.785
ENSNLEG00000004385 Nomascus leucogenys ENSNLEG00000004385 I 0.824
ENSP00000266269 Macaca fascicularis ENSP00000266269 I 0.824
ENSP00000266269-D1 Bos grunniens ENSP00000266269-D1 I 0.824
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I 0.824
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.825
ENSPSIG00000016553 Pelodiscus sinensis ENSPSIG00000016553 I 0.825
ENSSTOG00000020707 Ictidomys tridecemlineatus ENSSTOG00000020707 I 0.824
Gfo_R010882 Geospiza fortis Gfo_R010882 I 0.825
Myotis_brandtii_PATZ1_10027570 Myotis brandtii Myotis_brandtii_PATZ1_10027570 I 0.824
PATZ1 Tursiops truncatus ENSTTRG00000010279 I 0.824
PATZ1 Pteropus vampyrus ENSPVAG00000001749 I 0.824
PATZ1 Pan troglodytes ENSPTRG00000014268 I 0.824
PATZ1 Ornithorhynchus anatinus ENSOANG00000014654 I 0.824
PATZ1 Otolemur garnettii ENSOGAG00000027905 I 0.824
Patz1 Mus musculus ENSMUSG00000020453 I 0.824
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.824
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.824
PATZ1 Microcebus murinus ENSMICG00000005430 I 0.824
PATZ1 Meleagris gallopavo ENSMGAG00000008439 I 0.827
PATZ1 Loxodonta africana ENSLAFG00000002317 I 0.801
PATZ1 Gorilla gorilla ENSGGOG00000017171 I 0.824
PATZ1 Homo sapiens ENSG00000100105 D 0.824
PATZ1 Dasypus novemcinctus ENSDNOG00000003183 I 0.824
PATZ1 Cavia porcellus ENSCPOG00000010787 I 0.823
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.824
PATZ1 Bos taurus ENSBTAG00000005478 I 0.824
Pvit_03702 Pogona vitticeps Pvit_03702 I 0.825
Tal_R008892 Tyto alba Tal_R008892 I 0.825