ENSLACG00000016839 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000016839 T097155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.792 0.933
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.792 0.933
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.792 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000019138 C2H2 ZF 267 289
ENSLACP00000019138 C2H2 ZF 330 350
ENSLACP00000019138 C2H2 ZF 356 378
ENSLACP00000019138 C2H2 ZF 386 409
ENSLACP00000019138 C2H2 ZF 415 437
ENSLACP00000019138 C2H2 ZF 469 491

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007074 Ailuropoda melanoleuca ENSAMEG00000007074 I 0.792
PATZ1 Bos taurus ENSBTAG00000005478 I 0.792
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.792
PATZ1 Cavia porcellus ENSCPOG00000010787 I 0.792
PATZ1 Dasypus novemcinctus ENSDNOG00000003183 I 0.792
PATZ1 Homo sapiens ENSG00000100105 D 0.792
PATZ1 Gorilla gorilla ENSGGOG00000017171 I 0.792
PATZ1 Microcebus murinus ENSMICG00000005430 I 0.792
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.792
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.792
Patz1 Mus musculus ENSMUSG00000020453 I 0.792
ENSNLEG00000004385 Nomascus leucogenys ENSNLEG00000004385 I 0.792
PATZ1 Ornithorhynchus anatinus ENSOANG00000014654 I 0.792
PATZ1 Otolemur garnettii ENSOGAG00000027905 I 0.792
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I 0.792
PATZ1 Pan troglodytes ENSPTRG00000014268 I 0.792
PATZ1 Pteropus vampyrus ENSPVAG00000001749 I 0.792
ENSSTOG00000020707 Ictidomys tridecemlineatus ENSSTOG00000020707 I 0.792
PATZ1 Tursiops truncatus ENSTTRG00000010279 I 0.792
ENSP00000266269-D1 Bos grunniens ENSP00000266269-D1 I 0.792
ENSP00000266269 Macaca fascicularis ENSP00000266269 I 0.792
Myotis_brandtii_PATZ1_10027570 Myotis brandtii Myotis_brandtii_PATZ1_10027570 I 0.792
ENSAPLG00000003934 Anas platyrhynchos ENSAPLG00000003934 I 0.791
ENSFALG00000007450 Ficedula albicollis ENSFALG00000007450 I 0.791
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.791
ENSPSIG00000016553 Pelodiscus sinensis ENSPSIG00000016553 I 0.791
Aan_R008287 Calypte anna Aan_R008287 I 0.791
Afo_R009044 Aptenodytes forsteri Afo_R009044 I 0.791
Brh_R010628 Buceros rhinoceros Brh_R010628 I 0.791
Gfo_R010882 Geospiza fortis Gfo_R010882 I 0.791
Pvit_03702 Pogona vitticeps Pvit_03702 I 0.791
Tal_R008892 Tyto alba Tal_R008892 I 0.791
PATZ1 Gallus gallus ENSGALG00000006934 I 0.789
PATZ1 Meleagris gallopavo ENSMGAG00000008439 I 0.789
PATZ1 Loxodonta africana ENSLAFG00000002317 I 0.769