BCL6 (Gallus gallus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGALG00000007357 T095881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.827 0.993
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.827 0.993
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.827 0.993
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.827 0.993
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.827 0.993
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.827 0.993
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.827 0.993
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.827 0.993
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.827 0.993
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.827 0.993
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.827 0.993
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.827 0.993
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.827 0.993
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.827 0.993
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.827 0.993
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.821 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000011884 C2H2 ZF 520 543
ENSGALP00000011884 C2H2 ZF 548 570
ENSGALP00000011884 C2H2 ZF 576 598
ENSGALP00000011884 C2H2 ZF 604 626
ENSGALP00000011884 C2H2 ZF 632 654
ENSGALP00000011884 C2H2 ZF 660 683

Links

Other C2H2 ZF family TFs
Other Gallus gallus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcin07g06120 Botrytis cinerea Bcin07g06120 N
CFIO01_13657 Colletotrichum fioriniae CFIO01_13657 I
CGGC5_1182 Colletotrichum gloeosporioides CGGC5_1182 I
CSUB01_04506 Colletotrichum sublineola CSUB01_04506 I
estExt_fgenesh2_pg.C_120074 Neurospora discreta estExt_fgenesh2_pg.C_120074 I
fgenesh1_pm.C_scaffold_3000627 Cryphonectria parasitica fgenesh1_pm.C_scaffold_3000627 I
GGTG_02921 Gaeumannomyces graminis GGTG_02921 I
GLRG_02795 Colletotrichum graminicola GLRG_02795 I
GMDG_04017 Pseudogymnoascus destructans GMDG_04017 I
MAPG_00912 Magnaporthe poae MAPG_00912 I
MBM_01735 Marssonina brunnea MBM_01735 I
MGG_01776 Magnaporthe oryzae MGG_01776 I
NCU05242 Neurospora crassa NCU05242 D
NEUTE1DRAFT_121638 Neurospora tetrasperma NEUTE1DRAFT_121638 I
OIDMADRAFT_140709 Oidiodendron maius OIDMADRAFT_140709 I
PFICI_04450 Pestalotiopsis fici PFICI_04450 I
PODANS_3_3750 Podospora anserina PODANS_3_3750 I
SMAC_01749 Sordaria macrospora SMAC_01749 I
THITE_2115801 Thielavia terrestris THITE_2115801 I
V499_02646 Pseudogymnoascus pannorum V499_02646 I