fgenesh1_pm.C_scaffold_3000627 (Cryphonectria parasitica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pm.C_scaffold_3000627 T146248_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05242
M01884_2.00 		Neurospora crassa
NHCCCRCN
NGYGGGDN		 PBM
Weirauch et al.(2014)
pTH8950 		0.822 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_3000627 C2H2 ZF 73 97
fgenesh1_pm.C_scaffold_3000627 C2H2 ZF 103 127

Links

Other C2H2 ZF family TFs
Other Cryphonectria parasitica TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NEUTE1DRAFT_121638 Neurospora tetrasperma NEUTE1DRAFT_121638 I 0.822
SMAC_01749 Sordaria macrospora SMAC_01749 I 0.822
estExt_fgenesh2_pg.C_120074 Neurospora discreta estExt_fgenesh2_pg.C_120074 I 0.822
NCU05242 Neurospora crassa NCU05242 D 0.822
PODANS_3_3750 Podospora anserina PODANS_3_3750 I 0.812
THITE_2115801 Thielavia terrestris THITE_2115801 I 0.812
CFIO01_13657 Colletotrichum fioriniae CFIO01_13657 I 0.793
CGGC5_1182 Colletotrichum gloeosporioides CGGC5_1182 I 0.793
Cob_10554 Colletotrichum orbiculare Cob_10554 I 0.793
CSUB01_04506 Colletotrichum sublineola CSUB01_04506 I 0.793
GGTG_02921 Gaeumannomyces graminis GGTG_02921 I 0.788
GLRG_02795 Colletotrichum graminicola GLRG_02795 I 0.787
GMDG_04017 Pseudogymnoascus destructans GMDG_04017 I 0.774
V499_02646 Pseudogymnoascus pannorum V499_02646 I 0.774
PFICI_04450 Pestalotiopsis fici PFICI_04450 I 0.770
A1O3_02841 Capronia epimyces A1O3_02841 I 0.766
A1O7_04026 Cladophialophora yegresii A1O7_04026 I 0.766
G647_04666 Cladophialophora carrionii G647_04666 I 0.766
PV04_05279 Capronia semiimmersa PV04_05279 I 0.766
PV10_00514 Exophiala mesophila PV10_00514 I 0.766
Z517_11712 Fonsecaea pedrosoi Z517_11712 I 0.766
Z518_10184 Rhinocladiella mackenziei Z518_10184 I 0.766
MBM_01735 Marssonina brunnea MBM_01735 I 0.764
OIDMADRAFT_140709 Oidiodendron maius OIDMADRAFT_140709 I 0.764
A1O1_00801 Capronia coronata A1O1_00801 I 0.761
MAPG_00912 Magnaporthe poae MAPG_00912 I 0.758
PV05_01304 Exophiala xenobiotica PV05_01304 N 0.756