ENSLACG00000004705 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000004705 T096989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.778 0.885
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.778 0.885
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.778 0.885
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.778 0.885
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.778 0.885
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.778 0.885
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.778 0.885
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.778 0.885
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.778 0.885
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.778 0.885
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.778 0.885
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.778 0.885
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.774 0.876
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000005295 C2H2 ZF 151 173
ENSLACP00000005295 C2H2 ZF 182 204
ENSLACP00000005295 C2H2 ZF 208 230
ENSLACP00000005295 C2H2 ZF 240 262
ENSLACP00000005295 C2H2 ZF 268 288

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB06986.1 Alternaria brassicicola AB06986.1 I 0.000
ACLA_098160 Aspergillus clavatus CADACLAG00009206 I 0.000
AFUA_6G02330 Aspergillus fumigatus CADAFUAG00000640 I 0.000
AOL_s00004g648 Arthrobotrys oligospora AOL_s00004g648 I 0.000
ARB_01992 Arthroderma benhamiae ARB_01992 I 0.000
ATEG_07219 Aspergillus terreus CADATEAG00001089 I 0.000
AUEXF2481DRAFT_8523 Aureobasidium subglaciale AUEXF2481DRAFT_8523 I 0.000
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I 0.000
CADAFLAG00008794 Aspergillus flavus CADAFLAG00008794 I 0.000
CADANGAG00010285 Aspergillus niger CADANGAG00010285 I 0.000
CIMG_05854 Coccidioides immitis CIMG_05854 I 0.000
COCC4DRAFT_55544 Bipolaris maydis COCC4DRAFT_55544 I 0.000
COCCADRAFT_21675 Bipolaris zeicola COCCADRAFT_21675 I 0.000
COCMIDRAFT_81911 Bipolaris oryzae COCMIDRAFT_81911 I 0.000
COCSADRAFT_21477 Bipolaris sorokiniana COCSADRAFT_21477 I 0.000
COCVIDRAFT_21164 Bipolaris victoriae COCVIDRAFT_21164 I 0.000
CPC735_024740 Coccidioides posadasii CPC735_024740 I 0.000
DOTSEDRAFT_68063 Dothistroma septosporum DOTSEDRAFT_68063 I 0.000
estExt_fgenesh1_pg.C_20199 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20199 I 0.000
estExt_fgenesh1_pg.C_chr_40524 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_40524 I 0.000
EURHEDRAFT_452525 Aspergillus ruber EURHEDRAFT_452525 I 0.000
fgenesh1_pm.00855_#_114 Aspergillus carbonarius fgenesh1_pm.00855_#_114 I 0.000
GSTUM_00012177001 Tuber melanosporum GSTUM_00012177001 I 0.000
H101_06341 Trichophyton interdigitale H101_06341 I 0.000
H102_07503 Trichophyton rubrum H102_07503 I 0.000
H105_07531 Trichophyton soudanense H105_07531 I 0.000
HCBG_05620 Histoplasma capsulatum HCBG_05620 D 0.000
LEMA_P039610.1 Leptosphaeria maculans LEMA_P039610.1 I 0.000
M437DRAFT_72508 Aureobasidium melanogenum M437DRAFT_72508 I 0.000
M438DRAFT_354465 Aureobasidium pullulans M438DRAFT_354465 I 0.000
MBM_09565 Marssonina brunnea MBM_09565 I 0.000
MCYG_00576 Microsporum canis MCYG_00576 I 0.000
MCYG_00576 Arthroderma otae MCYG_00576 I 0.000
MGG_02962 Magnaporthe oryzae MGG_02962 N 0.000
MGYG_01386 Microsporum gypseum MGYG_01386 I 0.000
MPH_04742 Macrophomina phaseolina MPH_04742 I 0.000
MYCFIDRAFT_89500 Pseudocercospora fijiensis MYCFIDRAFT_89500 I 0.000
Mycgr3G109237 Zymoseptoria tritici Mycgr3G109237 I 0.000
NFIA_048590 Neosartorya fischeri CADNFIAG00005471 I 0.000
OIDMADRAFT_116523 Oidiodendron maius OIDMADRAFT_116523 I 0.000
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I 0.000
Pc22g23650 Penicillium chrysogenum Pc22g23650 I 0.000
PCH_Pc22g23650 Penicillium rubens PCH_Pc22g23650 I 0.000
PDE_03379 Penicillium oxalicum PDE_03379 I 0.000
PDIP_61980 Penicillium digitatum PDIP_61980 I 0.000
PEX1_027650 Penicillium expansum PEX1_027650 I 0.000
PFICI_02807 Pestalotiopsis fici PFICI_02807 I 0.000
PITC_053720 Penicillium italicum PITC_053720 I 0.000
PTRG_05347 Pyrenophora triticirepentis PTRG_05347 I 0.000
PV09_00253 Verruconis gallopava PV09_00253 I 0.000
PVAR5_6560 Byssochlamys spectabilis PVAR5_6560 I 0.000
SEPMUDRAFT_146422 Sphaerulina musiva SEPMUDRAFT_146422 I 0.000
SETTUDRAFT_102178 Setosphaeria turcica SETTUDRAFT_102178 I 0.000
SNOG_07682 Phaeosphaeria nodorum SNOG_07682 I 0.000
SNOG_07682 Stagonospora nodorum SNOG_07682 I 0.000
synt_with_mycgr.1__94 Mycosphaerella fijiensis synt_with_mycgr.1__94 I 0.000
TEQG_05447 Trichophyton equinum TEQG_05447 I 0.000
TESG_05799 Trichophyton tonsurans TESG_05799 I 0.000
U727_00433250161 Penicillium solitum U727_00433250161 I 0.000
UCRNP2_2338 Neofusicoccum parvum UCRNP2_2338 I 0.000
W97_05539 Coniosporium apollinis W97_05539 I 0.000