ENSLACG00000004705 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000004705 T096989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.778 0.885
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.778 0.885
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.778 0.885
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.778 0.885
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.778 0.885
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.778 0.885
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.778 0.885
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.778 0.885
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.778 0.885
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.778 0.885
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.778 0.885
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.778 0.885
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.774 0.876
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000005295 C2H2 ZF 151 173
ENSLACP00000005295 C2H2 ZF 182 204
ENSLACP00000005295 C2H2 ZF 208 230
ENSLACP00000005295 C2H2 ZF 240 262
ENSLACP00000005295 C2H2 ZF 268 288

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLOCG00000004887 Lepisosteus oculatus ENSLOCG00000004887 I 0.793
ENSAMXG00000011013 Astyanax mexicanus ENSAMXG00000011013 I 0.782
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.782
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.778
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.778
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.778
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.778
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.778
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.778
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.778
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.778
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.778
SNAI2 Equus caballus ENSECAG00000010120 I 0.778
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.778
SNAI2 Felis catus ENSFCAG00000015779 I 0.778
SNAI2 Homo sapiens ENSG00000019549 D 0.778
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.778
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.778
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.778
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.778
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.778
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.778
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.778
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.778
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.778
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.778
Snai2 Mus musculus ENSMUSG00000022676 D 0.778
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.778
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.778
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.778
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.778
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.778
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.778
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.778
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.778
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.778
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.778
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.778
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.778
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.778
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.778
Aan_R012932 Calypte anna Aan_R012932 I 0.778
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.778
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.778
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.778
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.778
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.778
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.778
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.778
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.778
Tal_R003673 Tyto alba Tal_R003673 I 0.778
AAB34088 Xenopus laevis AAB34088 I 0.778
AAK54135 Xenopus tropicalis AAK54135 I 0.778
AAK54137 Xenopus laevis AAK54137 I 0.778
AAK54139 Xenopus laevis AAK54139 I 0.778
snai2 Xenopus tropicalis XB-GENE-487371 I 0.778
snai2.L Xenopus laevis XB-GENE-6255814 I 0.778
snai2.S Xenopus laevis XB-GENE-865699 I 0.778
SNAI2 Bos taurus ENSBTAG00000013227 I 0.774
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.774
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.774
SNAI3 Ornithorhynchus anatinus ENSOANG00000011365 N 0.772
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.770
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.770
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.760
ENSPSIG00000004262 Pelodiscus sinensis ENSPSIG00000004262 N 0.760
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.760
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I 0.758
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I 0.758
SNAI3 Monodelphis domestica ENSMODG00000004165 N 0.758
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I 0.758
snai2 Oryzias latipes ENSORLG00000017475 I 0.758
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I 0.758
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I 0.758
snai2 Takifugu rubripes ENSTRUG00000006860 I 0.758
ENSXMAG00000019030 Xiphophorus maculatus ENSXMAG00000019030 I 0.758
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.758
snai2 Danio rerio ENSDARG00000040046 I 0.756