ENSLOCG00000007968 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000007968 T097684_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF384
M04451_2.00 		Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA		 SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX 		0.759 0.870
ZNF384
M08306_2.00 		Homo sapiens
CTTTTTTTT
AAAAAAAAG		 ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE 		0.759 0.870
ZNF384
M08090_2.00 		Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW		 ChIP-seq
Mathelier et al.(2014)
MA1125.1 		0.759 0.870
ZNF384
M08888_2.00 		Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV		 Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C 		0.759 0.870
ZNF384
M10209_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CIZ_01 		0.759 0.870
ZNF384
M04452_2.00 		Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM		 SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX 		0.759 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000009686 C2H2 ZF 245 267
ENSLOCP00000009686 C2H2 ZF 273 295
ENSLOCP00000009686 C2H2 ZF 301 323
ENSLOCP00000009686 C2H2 ZF 329 351
ENSLOCP00000009686 C2H2 ZF 357 379
ENSLOCP00000009686 C2H2 ZF 385 409
ENSLOCP00000009686 C2H2 ZF 415 437
ENSLOCP00000009686 C2H2 ZF 445 467

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG002534.1 Alligator sinensis Alligator_sinensis_CCG002534.1 I 0.764
Cmyd_10003951 Chelonia mydas Cmyd_10003951 I 0.764
ENSAMEG00000014121 Ailuropoda melanoleuca ENSAMEG00000014121 I 0.759
ENSAMXG00000014229 Astyanax mexicanus ENSAMXG00000014229 I 0.806
ENSCSAG00000010379 Chlorocebus sabaeus ENSCSAG00000010379 I 0.759
ENSFALG00000004741 Ficedula albicollis ENSFALG00000004741 I 0.770
ENSGMOG00000015258 Gadus morhua ENSGMOG00000015258 N 0.764
ENSMPUG00000016838 Mustela putorius furo ENSMPUG00000016838 I 0.759
ENSNLEG00000004506 Nomascus leucogenys ENSNLEG00000004506 I 0.759
ENSONIG00000004947 Oreochromis niloticus ENSONIG00000004947 N 0.801
ENSONIG00000013041 Oreochromis niloticus ENSONIG00000013041 I 0.805
ENSPANG00000014845 Papio anubis ENSPANG00000014845 I 0.759
ENSPFOG00000001513 Poecilia formosa ENSPFOG00000001513 I 0.797
ENSPFOG00000015360 Poecilia formosa ENSPFOG00000015360 I 0.799
ENSPPYG00000004196 Pongo abelii ENSPPYG00000004196 I 0.759
ENSSHAG00000015330 Sarcophilus harrisii ENSSHAG00000015330 I 0.781
ENSSTOG00000009902 Ictidomys tridecemlineatus ENSSTOG00000009902 I 0.759
ENSXMAG00000011034 Xiphophorus maculatus ENSXMAG00000011034 N 0.798
ENSXMAG00000016787 Xiphophorus maculatus ENSXMAG00000016787 I 0.797
Myotis_brandtii_ZNF384_10009390 Myotis brandtii Myotis_brandtii_ZNF384_10009390 I 0.757
ZNF384 Pan troglodytes ENSPTRG00000004584 I 0.759
ZNF384 Canis familiaris ENSCAFG00000014740 I 0.759
ZNF384 Choloepus hoffmanni ENSCHOG00000006697 I 0.759
ZNF384 Callithrix jacchus ENSCJAG00000007944 I 0.759
ZNF384 Erinaceus europaeus ENSEEUG00000012950 I 0.766
ZNF384 Felis catus ENSFCAG00000006882 I 0.759
ZNF384 Sus scrofa ENSSSCG00000000702 I 0.759
ZNF384 Homo sapiens ENSG00000126746 D 0.759
ZNF384 Oryctolagus cuniculus ENSOCUG00000003747 I 0.759
ZNF384 Gorilla gorilla ENSGGOG00000016048 I 0.759
ZNF384 Loxodonta africana ENSLAFG00000008381 I 0.759
ZNF384 Procavia capensis ENSPCAG00000012951 I 0.759
ZNF384 Myotis lucifugus ENSMLUG00000013771 I 0.757
ZNF384 Ochotona princeps ENSOPRG00000003626 I 0.759
ZNF384 Macaca mulatta ENSMMUG00000016990 I 0.759
ZNF384 Monodelphis domestica ENSMODG00000018105 I 0.781
ZNF384 Otolemur garnettii ENSOGAG00000010052 I 0.759
znf384l Gasterosteus aculeatus ENSGACG00000001879 N 0.799
znf384l Oryzias latipes ENSORLG00000006888 N 0.790
znf384l Tetraodon nigroviridis ENSTNIG00000000726 N 0.802
znf384l Takifugu rubripes ENSTRUG00000004550 N 0.802
znf384l Danio rerio ENSDARG00000001015 N 0.781