CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bnc2
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000007162
T104808_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000008983
C2H2 ZF
340
363
VCCNSCGKTFYDKGTLKIHYNAVH
ENSORLP00000008983
C2H2 ZF
368
390
HRCTIEGCNMVFSSLRSRNRHSA
ENSORLP00000008983
C2H2 ZF
967
989
LCNICHKMYSNKGTLRVHYKTVH
ENSORLP00000008983
C2H2 ZF
994
1017
HKCKIPGCNMVFSSVRSRNRHSQN
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG4282
Drosophila melanogaster
FBgn0034114
N
GD11186
Drosophila simulans
FBgn0182940
N
GE11783
Drosophila yakuba
FBgn0229575
N
GF13592
Drosophila ananassae
FBgn0090620
N
GG20598
Drosophila erecta
FBgn0112787
N
GJ15087
Drosophila virilis
FBgn0202286
N
GM21689
Drosophila sechellia
FBgn0176568
N