CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bnc2
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000007162
T104808_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000008983
C2H2 ZF
340
363
VCCNSCGKTFYDKGTLKIHYNAVH
ENSORLP00000008983
C2H2 ZF
368
390
HRCTIEGCNMVFSSLRSRNRHSA
ENSORLP00000008983
C2H2 ZF
967
989
LCNICHKMYSNKGTLRVHYKTVH
ENSORLP00000008983
C2H2 ZF
994
1017
HKCKIPGCNMVFSSVRSRNRHSQN
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000017049
Gadus morhua
ENSGMOG00000017049
N
0.827
ENSPFOG00000012019
Poecilia formosa
ENSPFOG00000012019
N
0.824
ENSXMAG00000010107
Xiphophorus maculatus
ENSXMAG00000010107
N
0.824
bnc2
Takifugu rubripes
ENSTRUG00000010322
N
0.822
ENSONIG00000017483
Oreochromis niloticus
ENSONIG00000017483
N
0.815
ENSLACG00000003465
Latimeria chalumnae
ENSLACG00000003465
N
0.800
BNC2
Bos taurus
ENSBTAG00000003669
N
0.798