ZKSCAN1 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000005258 T105739_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zkscan1
M00771_2.00 		Mus musculus
NNNHDHDNNN
NNNHDHDNNN		 PBM
Weirauch et al.(2013)
pTH2280 		0.827 1.000
Zkscan1
M08985_2.00 		Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A 		0.827 1.000
ZKSCAN1
M05847_2.00 		Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN		 SMiLE-seq
Isakova et al.(2017)
ZKSCAN1 		0.825 0.993
ZKSCAN1
M08874_2.00 		Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004877 C2H2 ZF 377 399
ENSPCAP00000004877 C2H2 ZF 405 427
ENSPCAP00000004877 C2H2 ZF 433 455
ENSPCAP00000004877 C2H2 ZF 461 483
ENSPCAP00000004877 C2H2 ZF 489 511
ENSPCAP00000004877 C2H2 ZF 517 539

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004293 Calypte anna Aan_R004293 I
ACYPI007295 Acyrthosiphon pisum ACYPI007295 N
Afo_R013625 Aptenodytes forsteri Afo_R013625 I
BGIBMGA013173 Bombyx mori BGIBMGA013173 N
Brh_R005672 Buceros rhinoceros Brh_R005672 I
ENSAMXG00000008763 Astyanax mexicanus ENSAMXG00000008763 I
ENSAMXG00000020050 Astyanax mexicanus ENSAMXG00000020050 I
ENSAPLG00000003927 Anas platyrhynchos ENSAPLG00000003927 I
ENSFALG00000004754 Ficedula albicollis ENSFALG00000004754 I
ENSGMOG00000011558 Gadus morhua ENSGMOG00000011558 I
ENSLACG00000018117 Latimeria chalumnae ENSLACG00000018117 I
ENSLOCG00000004411 Lepisosteus oculatus ENSLOCG00000004411 I
ENSMEUG00000015884 Macropus eugenii ENSMEUG00000015884 I
ENSONIG00000008133 Oreochromis niloticus ENSONIG00000008133 I
ENSONIG00000008731 Oreochromis niloticus ENSONIG00000008731 I
ENSPFOG00000010412 Poecilia formosa ENSPFOG00000010412 I
ENSPFOG00000015158 Poecilia formosa ENSPFOG00000015158 I
ENSPSIG00000013581 Pelodiscus sinensis ENSPSIG00000013581 I
ENSXMAG00000008629 Xiphophorus maculatus ENSXMAG00000008629 I
ENSXMAG00000011266 Xiphophorus maculatus ENSXMAG00000011266 I
Gfo_R012737 Geospiza fortis Gfo_R012737 I
HMEL003564 Heliconius melpomene HMEL003564 N
Hsal_02263--XP_001122023.1_APIME Harpegnathos saltator Hsal_02263--XP_001122023.1_APIME N
LDEC010970 Leptinotarsa decemlineata LDEC010970 I
MCINX010388 Melitaea cinxia MCINX010388 N
MNT Oryzias latipes ENSORLG00000007865 I
MNT Taeniopygia guttata ENSTGUG00000008774 I
MNT Monodelphis domestica ENSMODG00000010713 I
MNT Meleagris gallopavo ENSMGAG00000008592 I
MNT Gallus gallus ENSGALG00000005830 I
MNT Gasterosteus aculeatus ENSGACG00000008790 I
MNT Danio rerio ENSDARG00000101859 I
mnt.L Xenopus laevis XB-GENE-6087152 I
mntb Takifugu rubripes ENSTRUG00000011273 I
mntb Oryzias latipes ENSORLG00000002734 I
mntb Gasterosteus aculeatus ENSGACG00000020487 I
mntb Danio rerio ENSDARG00000073988 I
Ogr16275 Ophisaurus gracilis Ogr16275 I
Pvit_02549 Pogona vitticeps Pvit_02549 I
TC015361 Tribolium castaneum TC015361 I