ENSPPYG00000005471 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000005471 T106816_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
opa
M03668_2.00 		Drosophila melanogaster
BVCCCCCCRYNGHB
VDCNRYGGGGGGBV		 SELEX
Nitta et al.(2015)
opa_1 		0.771 0.891
opa
M05861_2.00 		Drosophila melanogaster
VCCCCCCRYNGNK
MNCNRYGGGGGGB		 SMiLE-seq
Isakova et al.(2017)
Opa 		0.771 0.891
opa
M06468_2.00 		Drosophila melanogaster
GMCCCCCCGCDG
CHGCGGGGGGKC		 B1H
Mathelier et al.(2014)
MA0456.1 		0.771 0.891
opa
M06062_2.00 		Drosophila melanogaster
GMCCCCCCRCDG
CHGYGGGGGGKC		 B1H
Zhu et al.(2011)
opa_NAR_FBgn0003002 		0.771 0.891
opa
M06063_2.00 		Drosophila melanogaster
MKVMMCCCCMCYR
YRGKGGGGKKBMK		 B1H
Zhu et al.(2011)
Opa_SANGER_5_FBgn0003002 		0.771 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000006238 C2H2 ZF 179 206
ENSPPYP00000006238 C2H2 ZF 212 236
ENSPPYP00000006238 C2H2 ZF 242 266
ENSPPYP00000006238 C2H2 ZF 272 296

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001011001 Angiostrongylus cantonensis ACAC_0001011001 N 0.000
ACOC_0000620901 Angiostrongylus costaricensis ACOC_0000620901 N 0.000
ANCCAN_02239 Ancylostoma caninum ANCCAN_02239 N 0.000
ANCDUO_12773 Ancylostoma duodenale ANCDUO_12773 N 0.000
ASU_02611 Ascaris suum ASU_02611 N 0.000
CBG02238 Caenorhabditis briggsae CBG02238 N 0.000
CBG11894 Caenorhabditis briggsae CBG11894 N 0.000
CBN10862 Caenorhabditis brenneri CBN10862 N 0.000
CBN17666 Caenorhabditis brenneri CBN17666 N 0.000
CBN20898 Caenorhabditis brenneri CBN20898 N 0.000
CBN22260 Caenorhabditis brenneri CBN22260 N 0.000
cey-2 Caenorhabditis elegans WBGene00000473 N 0.000
cey-3 Caenorhabditis elegans WBGene00000474 N 0.000
CGOC_0000831401 Cylicostephanus goldi CGOC_0000831401 N 0.000
CJA04706 Caenorhabditis japonica CJA04706 N 0.000
CRE03641 Caenorhabditis remanei CRE03641 N 0.000
CRE03839 Caenorhabditis remanei CRE03839 N 0.000
CRE04844 Caenorhabditis remanei CRE04844 N 0.000
DICVIV_00632 Dictyocaulus viviparus DICVIV_00632 N 0.000
GPUH_0001628601 Gongylonema pulchrum GPUH_0001628601 N 0.000
HCOI00011100 Haemonchus contortus HCOI00011100 N 0.000
HCOI00340600 Haemonchus contortus HCOI00340600 N 0.000
HPLM_0001619301 Haemonchus placei HPLM_0001619301 N 0.000
LOAG_08235 Loa loa LOAG_08235 N 0.000
NBR_0001570201 Nippostrongylus brasiliensis NBR_0001570201 N 0.000
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N 0.000
NECAME_08819 Necator americanus NECAME_08819 N 0.000
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N 0.000
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N 0.000
OFLC_0001050101 Onchocerca flexuosa OFLC_0001050101 N 0.000
PPA14638 Pristionchus pacificus PPA14638 N 0.000
scaffold516-EXSNAP2012.12 Pristionchus exspectatus scaffold516-EXSNAP2012.12 N 0.000
TCNE_0001553701 Toxocara canis TCNE_0001553701 N 0.000
TELCIR_02717 Teladorsagia circumcincta TELCIR_02717 N 0.000
WBGene00246599 Onchocerca volvulus WBGene00246599 N 0.000
WUBG_17286 Wuchereria bancrofti WUBG_17286 N 0.000