CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPSIG00000011885
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000011885
T107658_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ref-2
M00621_2.00
Caenorhabditis elegans
CMYRSNGNBH
DVNCNSYRKG
PBM
Narasimhan et al.(2015)
pTH9089
0.767
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000013216
C2H2 ZF
55
82
HVCDWEGCAREKKPFRAKYKLINHLRVH
ENSPSIP00000013216
C2H2 ZF
88
112
FLCPFPGCEKVFARSENLKIHKRIH
ENSPSIP00000013216
C2H2 ZF
118
142
FVCGIAGCARSFANSSDRKKHAHVH
ENSPSIP00000013216
C2H2 ZF
148
172
YRCKAPECEKSYTHPSSLRKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
ENSCSAVG00000009510
Ciona savignyi
ENSCSAVG00000009510
N