ENSPTRG00000028866 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000028866 T108332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF587
M07746_2.00 		Homo sapiens
HDNNTDGCGCCCAACRYKGKNNNN
NNNNMCMRYGTTGGGCGCHANNHD		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF587.RCADE.ReprocessedData 		0.822 0.975
ZNF417
M07639_2.00 		Homo sapiens
BTGGCGCCMANHVHBKBNBNN
NNVNVMVDBDNTKGGCGCCAV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF417.RCADE.OriginalMapping 		0.774 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000048462 C2H2 ZF 242 264
ENSPTRP00000048462 C2H2 ZF 270 292
ENSPTRP00000048462 C2H2 ZF 298 320
ENSPTRP00000048462 C2H2 ZF 325 348
ENSPTRP00000048462 C2H2 ZF 354 376
ENSPTRP00000048462 C2H2 ZF 382 404
ENSPTRP00000048462 C2H2 ZF 410 432
ENSPTRP00000048462 C2H2 ZF 438 460
ENSPTRP00000048462 C2H2 ZF 466 488
ENSPTRP00000048462 C2H2 ZF 494 516
ENSPTRP00000048462 C2H2 ZF 522 544
ENSPTRP00000048462 C2H2 ZF 550 572

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035909 Oryza indica BGIOSGA035909 N
BGIOSGA037707 Oryza indica BGIOSGA037707 N
OBART12G17560 Oryza barthii OBART12G17560 N
OGLUM09G03830 Oryza glumaepatula OGLUM09G03830 N
OLONG_015006 Oryza longistaminata OLONG_015006 N
OLONG_026170 Oryza longistaminata OLONG_026170 N
OMERI12G12190 Oryza meridionalis OMERI12G12190 N
OMERI12G12200 Oryza meridionalis OMERI12G12200 N
ONIVA03G41670 Oryza nivara ONIVA03G41670 N
ONIVA03G41700 Oryza nivara ONIVA03G41700 N
ORGLA12G0150600 Oryza glaberrima ORGLA12G0150600 N
ORUFI12G19410 Oryza rufipogon ORUFI12G19410 N
ORUFI12G19440 Oryza rufipogon ORUFI12G19440 N