PRDM6 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000006781 T108588_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000006399 C2H2 ZF 475 496
ENSPVAP00000006399 C2H2 ZF 503 525
ENSPVAP00000006399 C2H2 ZF 531 553
ENSPVAP00000006399 C2H2 ZF 559 580

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo21950s010 Brassica oleracea Bo21950s010 N 0.000
Bo4g127100 Brassica oleracea Bo4g127100 N 0.000
Bo4g127230 Brassica oleracea Bo4g127230 N 0.000
Bo6g013290 Brassica oleracea Bo6g013290 N 0.000
Bo6g014350 Brassica oleracea Bo6g014350 N 0.000
Bo6g018670 Brassica oleracea Bo6g018670 N 0.000
Bo7g092540 Brassica oleracea Bo7g092540 N 0.000
Bo8g011140 Brassica oleracea Bo8g011140 N 0.000
Bra010027 Brassica rapa Bra010027 N 0.000
Bra014217 Brassica rapa Bra014217 N 0.000
Bra018727 Brassica rapa Bra018727 N 0.000
Bra033492 Brassica rapa Bra033492 N 0.000
Bra037434 Brassica rapa Bra037434 N 0.000
Thhalv10029256m.g Eutrema salsugineum Thhalv10029256m.g N 0.000