CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo21950s010
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo21950s010
T253063_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo21950s010.1
MADS box
3
54
RITKRESAATTFTKRSFGLHSKVAQLCLLNGAQIAVLATPPSANSNVSFFSF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g127100
Brassica oleracea
Bo4g127100
N
1.000
Bo4g127230
Brassica oleracea
Bo4g127230
N
1.000
Bra033492
Brassica rapa
Bra033492
N
0.875
Thhalv10029256m.g
Eutrema salsugineum
Thhalv10029256m.g
N
0.771
Bo7g092850
Brassica oleracea
Bo7g092850
N
0.750
Bra037434
Brassica rapa
Bra037434
N
0.750
Bra010027
Brassica rapa
Bra010027
N
0.729
Bo7g092540
Brassica oleracea
Bo7g092540
N
0.708
Bo8g011140
Brassica oleracea
Bo8g011140
N
0.708
Bra014217
Brassica rapa
Bra014217
N
0.708